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Cluster: CGMR037308_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_13025 k141_13025_8 4408 6228 - 3.A.1.106.2
NULL(UNKNOWN) k141_13025 k141_13025_9 6560 7192 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_13025 k141_13025_10 7376 7906 - Nitroreductase | Nitroreductase
TC k141_13025 k141_13025_11 8058 9380 + 2.A.23.1.2
pfam k141_13025 k141_13025_12 9537 9815 - Bac_DNA_binding | HU-HIG
CAZyme k141_13025 k141_13025_13 10038 11405 + GT2
Gene ID: k141_13025_8
Type: TC
Location: 4408 - 6228 (-)
Gene ID: k141_13025_9
Type:
Location: 6560 - 7192 (+)
Gene ID: k141_13025_10
Type: STP
Location: 7376 - 7906 (-)
Gene ID: k141_13025_11
Type: TC
Location: 8058 - 9380 (+)
Gene ID: k141_13025_12
Type: pfam
Location: 9537 - 9815 (-)
Gene ID: k141_13025_13
Type: CAZyme
Location: 10038 - 11405 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_13025_13 vegetarian > vegan 1.88605 0.04105

🧭 Explore Read Mapping of CGC

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