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Cluster: CGMR037179_CGC86

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23894 k141_23894_12 12554 13285 + 3.A.1.3.25
TC k141_23894 k141_23894_13 13307 14152 + 3.A.1.3.14
TC k141_23894 k141_23894_14 14164 14841 + 3.A.1.3.14
pfam k141_23894 k141_23894_15 14927 15742 + AP_endonuc_2
pfam k141_23894 k141_23894_16 15744 16589 + AP_endonuc_2
TC k141_23894 k141_23894_17 16657 18012 + 2.A.66.1.33
TC k141_23894 k141_23894_18 18318 19193 + 3.A.1.1.20
TC k141_23894 k141_23894_19 19183 20016 + 3.A.1.1.39
NULL(UNKNOWN) k141_23894 k141_23894_20 20031 22559 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_23894 k141_23894_21 22552 23631 + GH105
TF k141_23894 k141_23894_22 23692 24606 + HTH_AraC | HTH_AraC
TC k141_23894 k141_23894_23 24685 25944 + 3.A.1.1.44
pfam k141_23894 k141_23894_24 26181 26297 + Hol_Tox
TC k141_23894 k141_23894_25 26920 28284 + 3.A.1.1.3
TC k141_23894 k141_23894_26 28382 29302 + 3.A.1.1.11
TC k141_23894 k141_23894_27 29302 30180 + 3.A.1.1.11
pfam k141_23894 k141_23894_28 30294 31508 + ROK
CAZyme k141_23894 k141_23894_29 31538 33646 + GH36
pfam k141_23894 k141_23894_30 33679 35085 + FGGY_N
STP k141_23894 k141_23894_31 35076 36056 + Glucokinase
CAZyme k141_23894 k141_23894_32 36069 37529 + GH13_18
pfam k141_23894 k141_23894_33 37571 40189 + FAD_binding_2 | FAD_oxidored | FAD_oxidored
CAZyme k141_23894 k141_23894_34 40208 42646 + GH38
Gene ID: k141_23894_12
Type: TC
Location: 12554 - 13285 (+)
Gene ID: k141_23894_13
Type: TC
Location: 13307 - 14152 (+)
Gene ID: k141_23894_14
Type: TC
Location: 14164 - 14841 (+)
Gene ID: k141_23894_15
Type: pfam
Location: 14927 - 15742 (+)
Gene ID: k141_23894_16
Type: pfam
Location: 15744 - 16589 (+)
Gene ID: k141_23894_17
Type: TC
Location: 16657 - 18012 (+)
Gene ID: k141_23894_18
Type: TC
Location: 18318 - 19193 (+)
Gene ID: k141_23894_19
Type: TC
Location: 19183 - 20016 (+)
Gene ID: k141_23894_20
Type:
Location: 20031 - 22559 (+)
Gene ID: k141_23894_21
Type: CAZyme
Location: 22552 - 23631 (+)
Gene ID: k141_23894_22
Type: TF
Location: 23692 - 24606 (+)
Gene ID: k141_23894_23
Type: TC
Location: 24685 - 25944 (+)
Gene ID: k141_23894_24
Type: pfam
Location: 26181 - 26297 (+)
Gene ID: k141_23894_25
Type: TC
Location: 26920 - 28284 (+)
Gene ID: k141_23894_26
Type: TC
Location: 28382 - 29302 (+)
Gene ID: k141_23894_27
Type: TC
Location: 29302 - 30180 (+)
Gene ID: k141_23894_28
Type: pfam
Location: 30294 - 31508 (+)
Gene ID: k141_23894_29
Type: CAZyme
Location: 31538 - 33646 (+)
Gene ID: k141_23894_30
Type: pfam
Location: 33679 - 35085 (+)
Gene ID: k141_23894_31
Type: STP
Location: 35076 - 36056 (+)
Gene ID: k141_23894_32
Type: CAZyme
Location: 36069 - 37529 (+)
Gene ID: k141_23894_33
Type: pfam
Location: 37571 - 40189 (+)
Gene ID: k141_23894_34
Type: CAZyme
Location: 40208 - 42646 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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