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Cluster: CGMR037179_CGC84

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_196928 k141_196928_73 75569 76540 + 1.A.35.3.2
pfam k141_196928 k141_196928_74 76550 77404 + DUF4261
TC k141_196928 k141_196928_75 77470 78468 - 2.A.98.1.4
TF k141_196928 k141_196928_76 78653 79540 + HTH_1
pfam k141_196928 k141_196928_77 79673 81337 + VanW | G5
CAZyme k141_196928 k141_196928_78 81440 82756 + GH28
NULL(UNKNOWN) k141_196928 k141_196928_79 82879 83121 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_196928 k141_196928_80 83371 84720 + 3.A.1.1.3
TC k141_196928 k141_196928_81 84746 85702 + 3.A.1.1.4
TC k141_196928 k141_196928_82 85713 86555 + 3.A.1.1.34
CAZyme k141_196928 k141_196928_83 86570 88072 + GH51_1
TF k141_196928 k141_196928_84 88141 89124 + LacI
CAZyme k141_196928 k141_196928_85 89140 91563 + GH43_26
Gene ID: k141_196928_73
Type: TC
Location: 75569 - 76540 (+)
Gene ID: k141_196928_74
Type: pfam
Location: 76550 - 77404 (+)
Gene ID: k141_196928_75
Type: TC
Location: 77470 - 78468 (-)
Gene ID: k141_196928_76
Type: TF
Location: 78653 - 79540 (+)
Gene ID: k141_196928_77
Type: pfam
Location: 79673 - 81337 (+)
Gene ID: k141_196928_78
Type: CAZyme
Location: 81440 - 82756 (+)
Gene ID: k141_196928_79
Type:
Location: 82879 - 83121 (+)
Gene ID: k141_196928_80
Type: TC
Location: 83371 - 84720 (+)
Gene ID: k141_196928_81
Type: TC
Location: 84746 - 85702 (+)
Gene ID: k141_196928_82
Type: TC
Location: 85713 - 86555 (+)
Gene ID: k141_196928_83
Type: CAZyme
Location: 86570 - 88072 (+)
Gene ID: k141_196928_84
Type: TF
Location: 88141 - 89124 (+)
Gene ID: k141_196928_85
Type: CAZyme
Location: 89140 - 91563 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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