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Cluster: CGMR037179_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189349 k141_189349_127 126580 127317 - 3.A.1.3.14
TC k141_189349 k141_189349_128 127344 128009 - 3.A.1.3.10
TC k141_189349 k141_189349_129 128111 129037 - 3.A.1.3.10
pfam k141_189349 k141_189349_130 129311 130639 - Lar_N
pfam k141_189349 k141_189349_131 130931 132355 + Thi4 | Pyr_redox_2 | FAD-depend_C
CAZyme k141_189349 k141_189349_132 132468 134081 - CBM91 | GH43_10
pfam k141_189349 k141_189349_133 134071 135096 - Lipase_GDSL_2 | Lipase_GDSL_3
TC k141_189349 k141_189349_134 135106 135945 - 3.A.1.1.11
TC k141_189349 k141_189349_135 135958 136869 - 3.A.1.1.11
STP k141_189349 k141_189349_136 136958 138331 - SBP_bac_1
TF k141_189349 k141_189349_137 138606 139367 + HTH_AraC
TC k141_189349 k141_189349_138 139364 141112 + 8.A.59.2.1
Gene ID: k141_189349_127
Type: TC
Location: 126580 - 127317 (-)
Gene ID: k141_189349_128
Type: TC
Location: 127344 - 128009 (-)
Gene ID: k141_189349_129
Type: TC
Location: 128111 - 129037 (-)
Gene ID: k141_189349_130
Type: pfam
Location: 129311 - 130639 (-)
Gene ID: k141_189349_131
Type: pfam
Location: 130931 - 132355 (+)
Gene ID: k141_189349_132
Type: CAZyme
Location: 132468 - 134081 (-)
Gene ID: k141_189349_133
Type: pfam
Location: 134071 - 135096 (-)
Gene ID: k141_189349_134
Type: TC
Location: 135106 - 135945 (-)
Gene ID: k141_189349_135
Type: TC
Location: 135958 - 136869 (-)
Gene ID: k141_189349_136
Type: STP
Location: 136958 - 138331 (-)
Gene ID: k141_189349_137
Type: TF
Location: 138606 - 139367 (+)
Gene ID: k141_189349_138
Type: TC
Location: 139364 - 141112 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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