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Cluster: CGMR037179_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_219953 k141_219953_44 45416 46948 - GH13_44
TF k141_219953 k141_219953_45 47120 48058 + HTH_AraC | HTH_AraC
TC k141_219953 k141_219953_46 48097 49146 + 3.A.1.15.3
TC k141_219953 k141_219953_47 49147 49854 + 3.A.1.15.1
TC k141_219953 k141_219953_48 49854 50747 + 3.A.1.15.5
TC k141_219953 k141_219953_49 50749 52104 + 2.A.38.4.1
TC k141_219953 k141_219953_50 52204 52857 + 2.A.38.4.4
STP k141_219953 k141_219953_51 53150 53362 + FeoA
STP k141_219953 k141_219953_52 53378 53599 + FeoA
TC k141_219953 k141_219953_53 53676 55832 + 9.A.8.1.6
Gene ID: k141_219953_44
Type: CAZyme
Location: 45416 - 46948 (-)
Gene ID: k141_219953_45
Type: TF
Location: 47120 - 48058 (+)
Gene ID: k141_219953_46
Type: TC
Location: 48097 - 49146 (+)
Gene ID: k141_219953_47
Type: TC
Location: 49147 - 49854 (+)
Gene ID: k141_219953_48
Type: TC
Location: 49854 - 50747 (+)
Gene ID: k141_219953_49
Type: TC
Location: 50749 - 52104 (+)
Gene ID: k141_219953_50
Type: TC
Location: 52204 - 52857 (+)
Gene ID: k141_219953_51
Type: STP
Location: 53150 - 53362 (+)
Gene ID: k141_219953_52
Type: STP
Location: 53378 - 53599 (+)
Gene ID: k141_219953_53
Type: TC
Location: 53676 - 55832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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