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Cluster: CGMR037179_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_70458 k141_70458_18 22782 24551 - GH2
pfam k141_70458 k141_70458_19 24544 28521 - Glyco_hydro_2_C | Glyco_hydro_2_N
TC k141_70458 k141_70458_20 28571 30022 - 3.A.1.1.7
TC k141_70458 k141_70458_21 30063 30896 - 3.A.1.1.31
TC k141_70458 k141_70458_22 30910 31809 - 3.A.1.1.7
TF k141_70458 k141_70458_23 32041 33141 + GntR
pfam k141_70458 k141_70458_24 34185 34595 + SnoaL | SnoaL_2
TC k141_70458 k141_70458_25 34657 35991 - 2.A.66.1.25
CAZyme k141_70458 k141_70458_26 36076 38226 - GH112
TF k141_70458 k141_70458_27 38365 39363 + HTH_AraC | HTH_AraC
TC k141_70458 k141_70458_28 39338 41206 - 3.A.25.2.1
Gene ID: k141_70458_18
Type: CAZyme
Location: 22782 - 24551 (-)
Gene ID: k141_70458_19
Type: pfam
Location: 24544 - 28521 (-)
Gene ID: k141_70458_20
Type: TC
Location: 28571 - 30022 (-)
Gene ID: k141_70458_21
Type: TC
Location: 30063 - 30896 (-)
Gene ID: k141_70458_22
Type: TC
Location: 30910 - 31809 (-)
Gene ID: k141_70458_23
Type: TF
Location: 32041 - 33141 (+)
Gene ID: k141_70458_24
Type: pfam
Location: 34185 - 34595 (+)
Gene ID: k141_70458_25
Type: TC
Location: 34657 - 35991 (-)
Gene ID: k141_70458_26
Type: CAZyme
Location: 36076 - 38226 (-)
Gene ID: k141_70458_27
Type: TF
Location: 38365 - 39363 (+)
Gene ID: k141_70458_28
Type: TC
Location: 39338 - 41206 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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