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Cluster: CGMR037179_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_214950 k141_214950_72 74097 74948 - 8.A.5.1.4
TF k141_214950 k141_214950_73 75091 75474 + MerR
CAZyme k141_214950 k141_214950_74 75554 76945 - GH1
pfam k141_214950 k141_214950_75 77049 77984 - ROK
CAZyme k141_214950 k141_214950_76 77986 79842 - GH20
sulfatase k141_214950 k141_214950_77 79839 81338 - S1_61
CAZyme k141_214950 k141_214950_78 81342 84458 - GH38
TF k141_214950 k141_214950_79 84462 85229 - HTH_AraC
TC k141_214950 k141_214950_80 85214 86995 - 8.A.59.2.1
STP k141_214950 k141_214950_81 87116 88639 - SBP_bac_1
TC k141_214950 k141_214950_82 88721 89650 - 3.A.1.1.29
TC k141_214950 k141_214950_83 89702 90646 - 3.A.1.1.10
Gene ID: k141_214950_72
Type: TC
Location: 74097 - 74948 (-)
Gene ID: k141_214950_73
Type: TF
Location: 75091 - 75474 (+)
Gene ID: k141_214950_74
Type: CAZyme
Location: 75554 - 76945 (-)
Gene ID: k141_214950_75
Type: pfam
Location: 77049 - 77984 (-)
Gene ID: k141_214950_76
Type: CAZyme
Location: 77986 - 79842 (-)
Gene ID: k141_214950_77
Type: sulfatase
Location: 79839 - 81338 (-)
Gene ID: k141_214950_78
Type: CAZyme
Location: 81342 - 84458 (-)
Gene ID: k141_214950_79
Type: TF
Location: 84462 - 85229 (-)
Gene ID: k141_214950_80
Type: TC
Location: 85214 - 86995 (-)
Gene ID: k141_214950_81
Type: STP
Location: 87116 - 88639 (-)
Gene ID: k141_214950_82
Type: TC
Location: 88721 - 89650 (-)
Gene ID: k141_214950_83
Type: TC
Location: 89702 - 90646 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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