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Cluster: CGMR037179_CGC111

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_77222 k141_77222_14 18275 19192 + 3.A.1.3.20
TC k141_77222 k141_77222_15 19299 20099 + 3.A.1.3.20
TC k141_77222 k141_77222_16 20102 20845 + 3.A.1.3.20
TC k141_77222 k141_77222_17 20996 21751 + 3.A.1.3.20
TC k141_77222 k141_77222_18 21748 22527 + 3.A.1.3.20
STP k141_77222 k141_77222_19 22704 23972 + SBP_bac_1
pfam k141_77222 k141_77222_20 24078 24794 + Cupin_2
TC k141_77222 k141_77222_21 24954 26717 + 8.A.59.2.1
TF k141_77222 k141_77222_22 26698 28224 + HTH_AraC | HTH_AraC
STP k141_77222 k141_77222_23 28338 29657 + SBP_bac_1
TC k141_77222 k141_77222_24 29729 30640 + 3.A.1.1.20
TC k141_77222 k141_77222_25 30621 31496 + 3.A.1.1.46
TC k141_77222 k141_77222_26 31507 32862 + 2.A.66.1.33
CAZyme k141_77222 k141_77222_27 32908 35502 + CBM67 | GH78
Gene ID: k141_77222_14
Type: TC
Location: 18275 - 19192 (+)
Gene ID: k141_77222_15
Type: TC
Location: 19299 - 20099 (+)
Gene ID: k141_77222_16
Type: TC
Location: 20102 - 20845 (+)
Gene ID: k141_77222_17
Type: TC
Location: 20996 - 21751 (+)
Gene ID: k141_77222_18
Type: TC
Location: 21748 - 22527 (+)
Gene ID: k141_77222_19
Type: STP
Location: 22704 - 23972 (+)
Gene ID: k141_77222_20
Type: pfam
Location: 24078 - 24794 (+)
Gene ID: k141_77222_21
Type: TC
Location: 24954 - 26717 (+)
Gene ID: k141_77222_22
Type: TF
Location: 26698 - 28224 (+)
Gene ID: k141_77222_23
Type: STP
Location: 28338 - 29657 (+)
Gene ID: k141_77222_24
Type: TC
Location: 29729 - 30640 (+)
Gene ID: k141_77222_25
Type: TC
Location: 30621 - 31496 (+)
Gene ID: k141_77222_26
Type: TC
Location: 31507 - 32862 (+)
Gene ID: k141_77222_27
Type: CAZyme
Location: 32908 - 35502 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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