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Cluster: CGMR037179_CGC102

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_99727 k141_99727_6 2977 10215 + GH59
CAZyme k141_99727 k141_99727_7 10323 17219 + GH43_22 | GH43_24
pfam k141_99727 k141_99727_8 17293 18312 - ADH_zinc_N | AlaDh_PNT_C | ADH_N
TF k141_99727 k141_99727_9 18601 19293 + GntR
TC k141_99727 k141_99727_10 19317 21143 + 8.A.59.2.1
TF k141_99727 k141_99727_11 21121 22377 + HTH_AraC
TC k141_99727 k141_99727_12 22534 23430 + 3.A.1.1.7
TC k141_99727 k141_99727_13 23427 24269 + 3.A.1.1.17
CAZyme k141_99727 k141_99727_14 24282 27452 + GH38
STP k141_99727 k141_99727_15 27558 28955 + SBP_bac_1
CAZyme k141_99727 k141_99727_16 28974 30500 + GH51_1
Gene ID: k141_99727_6
Type: CAZyme
Location: 2977 - 10215 (+)
Gene ID: k141_99727_7
Type: CAZyme
Location: 10323 - 17219 (+)
Gene ID: k141_99727_8
Type: pfam
Location: 17293 - 18312 (-)
Gene ID: k141_99727_9
Type: TF
Location: 18601 - 19293 (+)
Gene ID: k141_99727_10
Type: TC
Location: 19317 - 21143 (+)
Gene ID: k141_99727_11
Type: TF
Location: 21121 - 22377 (+)
Gene ID: k141_99727_12
Type: TC
Location: 22534 - 23430 (+)
Gene ID: k141_99727_13
Type: TC
Location: 23427 - 24269 (+)
Gene ID: k141_99727_14
Type: CAZyme
Location: 24282 - 27452 (+)
Gene ID: k141_99727_15
Type: STP
Location: 27558 - 28955 (+)
Gene ID: k141_99727_16
Type: CAZyme
Location: 28974 - 30500 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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