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Cluster: CGMR037179_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_163923 k141_163923_15 15198 16184 - 3.A.1.5.20
TC k141_163923 k141_163923_16 16174 17151 - 3.A.1.5.20
TC k141_163923 k141_163923_17 17186 18868 - 3.A.1.5.22
TC k141_163923 k141_163923_18 18914 19777 - 3.A.1.5.20
TC k141_163923 k141_163923_19 19790 20746 - 3.A.1.5.20
TC k141_163923 k141_163923_20 21065 23671 - 3.A.3.2.21
pfam k141_163923 k141_163923_21 23832 24314 + LuxS
NULL(UNKNOWN) k141_163923 k141_163923_22 24582 25067 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_163923 k141_163923_23 25131 27002 - GH13_11
TC k141_163923 k141_163923_24 27094 28947 - 3.A.1.120.6
Gene ID: k141_163923_15
Type: TC
Location: 15198 - 16184 (-)
Gene ID: k141_163923_16
Type: TC
Location: 16174 - 17151 (-)
Gene ID: k141_163923_17
Type: TC
Location: 17186 - 18868 (-)
Gene ID: k141_163923_18
Type: TC
Location: 18914 - 19777 (-)
Gene ID: k141_163923_19
Type: TC
Location: 19790 - 20746 (-)
Gene ID: k141_163923_20
Type: TC
Location: 21065 - 23671 (-)
Gene ID: k141_163923_21
Type: pfam
Location: 23832 - 24314 (+)
Gene ID: k141_163923_22
Type:
Location: 24582 - 25067 (+)
Gene ID: k141_163923_23
Type: CAZyme
Location: 25131 - 27002 (-)
Gene ID: k141_163923_24
Type: TC
Location: 27094 - 28947 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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