Cluster: CGMR037091_CGC2
🧬 Cluster Details
- Gene Count: 35
- CAZyme Count: 16
- Substrate:
- Genome ID: CGMR037091
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_990779 | k141_990779_20 | 16719 | 18986 | - | CBM67 | GH78 |
| CAZyme | k141_990779 | k141_990779_21 | 18988 | 20493 | - | CE20 | CE20 |
| CAZyme | k141_990779 | k141_990779_22 | 20500 | 22929 | - | GH2 |
| CAZyme | k141_990779 | k141_990779_23 | 22933 | 24225 | - | GH1 |
| CAZyme | k141_990779 | k141_990779_24 | 24441 | 26249 | + | CBM32 | GH43_28 |
| CAZyme | k141_990779 | k141_990779_25 | 26249 | 28663 | + | GH3 |
| CAZyme | k141_990779 | k141_990779_26 | 28676 | 30859 | + | GH2 |
| NULL(UNKNOWN) | k141_990779 | k141_990779_27 | 30936 | 32996 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_990779 | k141_990779_28 | 33075 | 34622 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_990779 | k141_990779_29 | 34643 | 35575 | - | 3.A.1.1.10 |
| TC | k141_990779 | k141_990779_30 | 35590 | 36552 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | k141_990779 | k141_990779_31 | 36625 | 38364 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_990779 | k141_990779_32 | 38586 | 39269 | + | 9.B.28.1.2 |
| TF | k141_990779 | k141_990779_33 | 39330 | 40619 | - | HTH_AraC | HTH_AraC |
| STP | k141_990779 | k141_990779_34 | 40632 | 41222 | - | TetR_N |
| TC | k141_990779 | k141_990779_35 | 41366 | 42724 | + | 2.A.66.1.26 |
| NULL(UNKNOWN) | k141_990779 | k141_990779_36 | 42785 | 43414 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_990779 | k141_990779_37 | 43482 | 45002 | - | Apiosidase | DUF5060 | DUF5605 |
| CAZyme | k141_990779 | k141_990779_38 | 45020 | 46072 | - | GH43_24 |
| NULL(UNKNOWN) | k141_990779 | k141_990779_39 | 46142 | 46369 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_990779 | k141_990779_40 | 46557 | 49226 | - | CBM67 | GH78 |
| CAZyme | k141_990779 | k141_990779_41 | 49472 | 51760 | + | GH3 |
| CAZyme | k141_990779 | k141_990779_42 | 51760 | 54102 | + | GH2 |
| STP | k141_990779 | k141_990779_43 | 54105 | 54572 | + | Glyoxalase |
| pfam | k141_990779 | k141_990779_44 | 54574 | 55341 | + | adh_short | KR | adh_short_C2 | SDR |
| CAZyme | k141_990779 | k141_990779_45 | 55375 | 56742 | + | GH43_24 |
| NULL(UNKNOWN) | k141_990779 | k141_990779_46 | 56872 | 56985 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_990779 | k141_990779_47 | 56988 | 58331 | - | GH1 |
| TF | k141_990779 | k141_990779_48 | 58981 | 59952 | + | HTH_3 |
| CAZyme | k141_990779 | k141_990779_49 | 59989 | 61701 | + | CBM34 | GH13_20 |
| NULL(UNKNOWN) | k141_990779 | k141_990779_50 | 61947 | 63521 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_990779 | k141_990779_51 | 63535 | 64854 | - | GH1 |
| pfam | k141_990779 | k141_990779_52 | 64887 | 65732 | - | AP_endonuc_2 |
| TC | k141_990779 | k141_990779_53 | 65764 | 67326 | - | 2.A.2.3.6 |
| CAZyme | k141_990779 | k141_990779_54 | 67347 | 69986 | - | CBM67 | GH78 |
Gene ID: k141_990779_20
Type: CAZyme
Location: 16719 - 18986 (-)
Type: CAZyme
Location: 16719 - 18986 (-)
Gene ID: k141_990779_21
Type: CAZyme
Location: 18988 - 20493 (-)
Type: CAZyme
Location: 18988 - 20493 (-)
Gene ID: k141_990779_22
Type: CAZyme
Location: 20500 - 22929 (-)
Type: CAZyme
Location: 20500 - 22929 (-)
Gene ID: k141_990779_23
Type: CAZyme
Location: 22933 - 24225 (-)
Type: CAZyme
Location: 22933 - 24225 (-)
Gene ID: k141_990779_24
Type: CAZyme
Location: 24441 - 26249 (+)
Type: CAZyme
Location: 24441 - 26249 (+)
Gene ID: k141_990779_25
Type: CAZyme
Location: 26249 - 28663 (+)
Type: CAZyme
Location: 26249 - 28663 (+)
Gene ID: k141_990779_26
Type: CAZyme
Location: 28676 - 30859 (+)
Type: CAZyme
Location: 28676 - 30859 (+)
Gene ID: k141_990779_27
Type:
Location: 30936 - 32996 (-)
Type:
Location: 30936 - 32996 (-)
Gene ID: k141_990779_28
Type:
Location: 33075 - 34622 (-)
Type:
Location: 33075 - 34622 (-)
Gene ID: k141_990779_29
Type: TC
Location: 34643 - 35575 (-)
Type: TC
Location: 34643 - 35575 (-)
Gene ID: k141_990779_30
Type: TC
Location: 35590 - 36552 (-)
Type: TC
Location: 35590 - 36552 (-)
Gene ID: k141_990779_31
Type:
Location: 36625 - 38364 (-)
Type:
Location: 36625 - 38364 (-)
Gene ID: k141_990779_32
Type: TC
Location: 38586 - 39269 (+)
Type: TC
Location: 38586 - 39269 (+)
Gene ID: k141_990779_33
Type: TF
Location: 39330 - 40619 (-)
Type: TF
Location: 39330 - 40619 (-)
Gene ID: k141_990779_34
Type: STP
Location: 40632 - 41222 (-)
Type: STP
Location: 40632 - 41222 (-)
Gene ID: k141_990779_35
Type: TC
Location: 41366 - 42724 (+)
Type: TC
Location: 41366 - 42724 (+)
Gene ID: k141_990779_36
Type:
Location: 42785 - 43414 (-)
Type:
Location: 42785 - 43414 (-)
Gene ID: k141_990779_37
Type: pfam
Location: 43482 - 45002 (-)
Type: pfam
Location: 43482 - 45002 (-)
Gene ID: k141_990779_38
Type: CAZyme
Location: 45020 - 46072 (-)
Type: CAZyme
Location: 45020 - 46072 (-)
Gene ID: k141_990779_39
Type:
Location: 46142 - 46369 (-)
Type:
Location: 46142 - 46369 (-)
Gene ID: k141_990779_40
Type: CAZyme
Location: 46557 - 49226 (-)
Type: CAZyme
Location: 46557 - 49226 (-)
Gene ID: k141_990779_41
Type: CAZyme
Location: 49472 - 51760 (+)
Type: CAZyme
Location: 49472 - 51760 (+)
Gene ID: k141_990779_42
Type: CAZyme
Location: 51760 - 54102 (+)
Type: CAZyme
Location: 51760 - 54102 (+)
Gene ID: k141_990779_43
Type: STP
Location: 54105 - 54572 (+)
Type: STP
Location: 54105 - 54572 (+)
Gene ID: k141_990779_44
Type: pfam
Location: 54574 - 55341 (+)
Type: pfam
Location: 54574 - 55341 (+)
Gene ID: k141_990779_45
Type: CAZyme
Location: 55375 - 56742 (+)
Type: CAZyme
Location: 55375 - 56742 (+)
Gene ID: k141_990779_46
Type:
Location: 56872 - 56985 (-)
Type:
Location: 56872 - 56985 (-)
Gene ID: k141_990779_47
Type: CAZyme
Location: 56988 - 58331 (-)
Type: CAZyme
Location: 56988 - 58331 (-)
Gene ID: k141_990779_48
Type: TF
Location: 58981 - 59952 (+)
Type: TF
Location: 58981 - 59952 (+)
Gene ID: k141_990779_49
Type: CAZyme
Location: 59989 - 61701 (+)
Type: CAZyme
Location: 59989 - 61701 (+)
Gene ID: k141_990779_50
Type:
Location: 61947 - 63521 (-)
Type:
Location: 61947 - 63521 (-)
Gene ID: k141_990779_51
Type: CAZyme
Location: 63535 - 64854 (-)
Type: CAZyme
Location: 63535 - 64854 (-)
Gene ID: k141_990779_52
Type: pfam
Location: 64887 - 65732 (-)
Type: pfam
Location: 64887 - 65732 (-)
Gene ID: k141_990779_53
Type: TC
Location: 65764 - 67326 (-)
Type: TC
Location: 65764 - 67326 (-)
Gene ID: k141_990779_54
Type: CAZyme
Location: 67347 - 69986 (-)
Type: CAZyme
Location: 67347 - 69986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
RUG626
Species
RUG626 sp947588955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.