Cluster: CGMR037040_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_20974 | k141_20974_157 | 145869 | 146255 | - | 1.A.22.1.1 |
| TC | k141_20974 | k141_20974_158 | 146334 | 147710 | - | 2.A.38.1.1 |
| CAZyme | k141_20974 | k141_20974_159 | 147707 | 148522 | - | GT2 |
Gene ID: k141_20974_157
Type: TC
Location: 145869 - 146255 (-)
Type: TC
Location: 145869 - 146255 (-)
Gene ID: k141_20974_158
Type: TC
Location: 146334 - 147710 (-)
Type: TC
Location: 146334 - 147710 (-)
Gene ID: k141_20974_159
Type: CAZyme
Location: 147707 - 148522 (-)
Type: CAZyme
Location: 147707 - 148522 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_20974_157 | vegan > omnivore | 1.73635 | 0.00581 |
| k141_20974_157 | vegetarian > omnivore | 3.30004 | 0.00573 |
| k141_20974_158 | vegetarian > omnivore | 1.35788 | 0.00573 |
| k141_20974_159 | vegan > omnivore | 1.63013 | 0.00581 |