Cluster: CGMR037040_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_9557 | k141_9557_37 | 30594 | 31310 | - | 9.B.20.2.2 |
| pfam | k141_9557 | k141_9557_38 | 31476 | 32813 | + | UPF0004 | Radical_SAM | TRAM_2 |
| CAZyme | k141_9557 | k141_9557_39 | 32853 | 34871 | + | GT41 |
Gene ID: k141_9557_37
Type: TC
Location: 30594 - 31310 (-)
Type: TC
Location: 30594 - 31310 (-)
Gene ID: k141_9557_38
Type: pfam
Location: 31476 - 32813 (+)
Type: pfam
Location: 31476 - 32813 (+)
Gene ID: k141_9557_39
Type: CAZyme
Location: 32853 - 34871 (+)
Type: CAZyme
Location: 32853 - 34871 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_9557_37 | vegetarian > omnivore | 1.13712 | 0.00573 |