Cluster: CGMR037040_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_21782 | k141_21782_20 | 18565 | 21591 | - | GH2 |
| pfam | k141_21782 | k141_21782_21 | 21713 | 22912 | - | PMI_typeI_cat | MPI_cupin_dom |
| TC | k141_21782 | k141_21782_22 | 22984 | 23484 | - | 4.A.1.1.1 |
| TC | k141_21782 | k141_21782_23 | 23544 | 25271 | - | 8.A.7.1.1 |
| TC | k141_21782 | k141_21782_24 | 25350 | 25607 | - | 8.A.8.1.1 |
Gene ID: k141_21782_20
Type: CAZyme
Location: 18565 - 21591 (-)
Type: CAZyme
Location: 18565 - 21591 (-)
Gene ID: k141_21782_21
Type: pfam
Location: 21713 - 22912 (-)
Type: pfam
Location: 21713 - 22912 (-)
Gene ID: k141_21782_22
Type: TC
Location: 22984 - 23484 (-)
Type: TC
Location: 22984 - 23484 (-)
Gene ID: k141_21782_23
Type: TC
Location: 23544 - 25271 (-)
Type: TC
Location: 23544 - 25271 (-)
Gene ID: k141_21782_24
Type: TC
Location: 25350 - 25607 (-)
Type: TC
Location: 25350 - 25607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_21782_22 | vegan > omnivore | 2.76277 | 0.00581 |
| k141_21782_22 | vegetarian > omnivore | 1.42943 | 0.00573 |