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Cluster: CGMR037040_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_9557 k141_9557_6 4997 5716 + GT25
STP k141_9557 k141_9557_7 5794 7335 + PALP
TC k141_9557 k141_9557_8 7384 7812 - 3.A.2.1.1
TC k141_9557 k141_9557_9 7843 9216 - 3.A.2.1.1
TC k141_9557 k141_9557_10 9233 10102 - 3.A.2.1.1
TC k141_9557 k141_9557_11 10121 11662 - 3.A.2.1.1
TC k141_9557 k141_9557_12 11675 12208 - 3.A.2.1.1
TC k141_9557 k141_9557_13 12221 12691 - 3.A.2.1.1
TC k141_9557 k141_9557_14 12741 12995 - 3.A.2.1.1
TC k141_9557 k141_9557_15 13052 13840 - 3.A.2.1.1
Gene ID: k141_9557_6
Type: CAZyme
Location: 4997 - 5716 (+)
Gene ID: k141_9557_7
Type: STP
Location: 5794 - 7335 (+)
Gene ID: k141_9557_8
Type: TC
Location: 7384 - 7812 (-)
Gene ID: k141_9557_9
Type: TC
Location: 7843 - 9216 (-)
Gene ID: k141_9557_10
Type: TC
Location: 9233 - 10102 (-)
Gene ID: k141_9557_11
Type: TC
Location: 10121 - 11662 (-)
Gene ID: k141_9557_12
Type: TC
Location: 11675 - 12208 (-)
Gene ID: k141_9557_13
Type: TC
Location: 12221 - 12691 (-)
Gene ID: k141_9557_14
Type: TC
Location: 12741 - 12995 (-)
Gene ID: k141_9557_15
Type: TC
Location: 13052 - 13840 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_9557_11 vegetarian > omnivore 1.26533 0.00573
k141_9557_11 vegan > omnivore 2.39052 0.00581
k141_9557_14 vegan > omnivore 1.40990 0.00581

🧭 Explore Read Mapping of CGC

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