Cluster: CGMR037040_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR037040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18045 | k141_18045_42 | 44928 | 45872 | + | 2.A.16.1.2 |
| TF | k141_18045 | k141_18045_43 | 45952 | 46665 | - | GntR |
| CAZyme | k141_18045 | k141_18045_44 | 46861 | 48366 | + | GH77 |
| CAZyme | k141_18045 | k141_18045_45 | 48366 | 50633 | + | GT35 |
| pfam | k141_18045 | k141_18045_46 | 50644 | 51435 | + | Exo_endo_phos |
| TC | k141_18045 | k141_18045_47 | 51446 | 53110 | + | 4.A.1.1.11 |
Gene ID: k141_18045_42
Type: TC
Location: 44928 - 45872 (+)
Type: TC
Location: 44928 - 45872 (+)
Gene ID: k141_18045_43
Type: TF
Location: 45952 - 46665 (-)
Type: TF
Location: 45952 - 46665 (-)
Gene ID: k141_18045_44
Type: CAZyme
Location: 46861 - 48366 (+)
Type: CAZyme
Location: 46861 - 48366 (+)
Gene ID: k141_18045_45
Type: CAZyme
Location: 48366 - 50633 (+)
Type: CAZyme
Location: 48366 - 50633 (+)
Gene ID: k141_18045_46
Type: pfam
Location: 50644 - 51435 (+)
Type: pfam
Location: 50644 - 51435 (+)
Gene ID: k141_18045_47
Type: TC
Location: 51446 - 53110 (+)
Type: TC
Location: 51446 - 53110 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.