dbCAN Logo

Cluster: CGMR037040_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_30115 k141_30115_84 91387 93216 + 2.A.37.1.10
pfam k141_30115 k141_30115_85 93261 93986 - RIO1 | APH | Kdo
pfam k141_30115 k141_30115_86 94286 94594 + MORN_2 | MORN_2 | MORN_2
CAZyme k141_30115 k141_30115_87 94696 95751 + GT9
pfam k141_30115 k141_30115_88 95823 96167 - CMD
TF k141_30115 k141_30115_89 96271 97161 + HTH_AraC | HTH_AraC
TC k141_30115 k141_30115_90 97238 99082 + 3.A.1.106.2
Gene ID: k141_30115_84
Type: TC
Location: 91387 - 93216 (+)
Gene ID: k141_30115_85
Type: pfam
Location: 93261 - 93986 (-)
Gene ID: k141_30115_86
Type: pfam
Location: 94286 - 94594 (+)
Gene ID: k141_30115_87
Type: CAZyme
Location: 94696 - 95751 (+)
Gene ID: k141_30115_88
Type: pfam
Location: 95823 - 96167 (-)
Gene ID: k141_30115_89
Type: TF
Location: 96271 - 97161 (+)
Gene ID: k141_30115_90
Type: TC
Location: 97238 - 99082 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_30115_87 vegetarian > omnivore 1.53371 0.00573
k141_30115_87 vegetarian > vegan 1.30821 0.04532
k141_30115_88 vegan > omnivore 1.10057 0.00581
k141_30115_88 vegetarian > omnivore 1.38258 0.00573
k141_30115_89 vegetarian > vegan 1.18825 0.04288

🧭 Explore Read Mapping of CGC

← Back to Cluster List