Cluster: CGMR037040_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037040
- CGC Family ID: CGCFAM_00784
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_30115 | k141_30115_1 | 2 | 664 | + | 1.B.40.1.5 |
| pfam | k141_30115 | k141_30115_2 | 795 | 1934 | + | DUF2827 |
| CAZyme | k141_30115 | k141_30115_3 | 2026 | 3558 | - | GT2 |
| TC | k141_30115 | k141_30115_4 | 3567 | 4754 | - | 2.A.33.1.2 |
| TC | k141_30115 | k141_30115_5 | 4964 | 6265 | + | 2.A.26.1.1 |
Gene ID: k141_30115_1
Type: TC
Location: 2 - 664 (+)
Type: TC
Location: 2 - 664 (+)
Gene ID: k141_30115_2
Type: pfam
Location: 795 - 1934 (+)
Type: pfam
Location: 795 - 1934 (+)
Gene ID: k141_30115_3
Type: CAZyme
Location: 2026 - 3558 (-)
Type: CAZyme
Location: 2026 - 3558 (-)
Gene ID: k141_30115_4
Type: TC
Location: 3567 - 4754 (-)
Type: TC
Location: 3567 - 4754 (-)
Gene ID: k141_30115_5
Type: TC
Location: 4964 - 6265 (+)
Type: TC
Location: 4964 - 6265 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_30115_2 | vegetarian > vegan | 1.07664 | 0.04669 |