Cluster: CGMR037040_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR037040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_28161 | k141_28161_27 | 32867 | 33757 | + | 3.A.1.14.1 |
| TC | k141_28161 | k141_28161_28 | 33757 | 34746 | + | 3.A.1.14.1 |
| TC | k141_28161 | k141_28161_29 | 34746 | 35729 | + | 3.A.1.14.1 |
| TC | k141_28161 | k141_28161_30 | 35729 | 36496 | + | 3.A.1.14.8 |
| TC | k141_28161 | k141_28161_31 | 36707 | 39124 | + | 1.B.55.1.3 |
| CAZyme | k141_28161 | k141_28161_32 | 39146 | 41062 | + | CE4 | GH153 |
| CAZyme | k141_28161 | k141_28161_33 | 41072 | 42313 | + | GT2 |
Gene ID: k141_28161_27
Type: TC
Location: 32867 - 33757 (+)
Type: TC
Location: 32867 - 33757 (+)
Gene ID: k141_28161_28
Type: TC
Location: 33757 - 34746 (+)
Type: TC
Location: 33757 - 34746 (+)
Gene ID: k141_28161_29
Type: TC
Location: 34746 - 35729 (+)
Type: TC
Location: 34746 - 35729 (+)
Gene ID: k141_28161_30
Type: TC
Location: 35729 - 36496 (+)
Type: TC
Location: 35729 - 36496 (+)
Gene ID: k141_28161_31
Type: TC
Location: 36707 - 39124 (+)
Type: TC
Location: 36707 - 39124 (+)
Gene ID: k141_28161_32
Type: CAZyme
Location: 39146 - 41062 (+)
Type: CAZyme
Location: 39146 - 41062 (+)
Gene ID: k141_28161_33
Type: CAZyme
Location: 41072 - 42313 (+)
Type: CAZyme
Location: 41072 - 42313 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_28161_27 | vegetarian > omnivore | 1.50034 | 0.00573 |
| k141_28161_28 | vegetarian > omnivore | 1.62618 | 0.00573 |