dbCAN HGM

Cluster: CGMR037040_CGC12

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	k141_4024	k141_4024_19	19534	20646	+	3.A.1.132.3
pfam	k141_4024	k141_4024_20	20719	21348	-	His_Phos_1
TC	k141_4024	k141_4024_21	21402	22769	-	1.B.17.3.7
TC	k141_4024	k141_4024_22	22853	24784	-	3.A.1.122.12
TC	k141_4024	k141_4024_23	24803	25984	-	3.A.1.122.12
pfam	k141_4024	k141_4024_24	26206	27879	+	tRNA-synt_1c \| tRNA-synt_1c_C \| tRNA-synt_1c_C2
pfam	k141_4024	k141_4024_25	27946	28386	+	CxxCxxCC
CAZyme	k141_4024	k141_4024_26	28531	30621	+	GH77
CAZyme	k141_4024	k141_4024_27	30633	32822	+	CBM48 \| GH13_9
CAZyme	k141_4024	k141_4024_28	32840	34831	+	GH13_11
pfam	k141_4024	k141_4024_29	34836	36146	+	NTP_transferase \| NTP_transf_3 \| Hexapep_GlmU
CAZyme	k141_4024	k141_4024_30	36237	37676	+	GT5
CAZyme	k141_4024	k141_4024_31	37793	40258	+	GT35

Gene ID: k141_4024_19
Type: TC
Location: 19534 - 20646 (+)

Gene ID: k141_4024_20
Type: pfam
Location: 20719 - 21348 (-)

Gene ID: k141_4024_21
Type: TC
Location: 21402 - 22769 (-)

Gene ID: k141_4024_22
Type: TC
Location: 22853 - 24784 (-)

Gene ID: k141_4024_23
Type: TC
Location: 24803 - 25984 (-)

Gene ID: k141_4024_24
Type: pfam
Location: 26206 - 27879 (+)

Gene ID: k141_4024_25
Type: pfam
Location: 27946 - 28386 (+)

Gene ID: k141_4024_26
Type: CAZyme
Location: 28531 - 30621 (+)

Gene ID: k141_4024_27
Type: CAZyme
Location: 30633 - 32822 (+)

Gene ID: k141_4024_28
Type: CAZyme
Location: 32840 - 34831 (+)

Gene ID: k141_4024_29
Type: pfam
Location: 34836 - 36146 (+)

Gene ID: k141_4024_30
Type: CAZyme
Location: 36237 - 37676 (+)

Gene ID: k141_4024_31
Type: CAZyme
Location: 37793 - 40258 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
k141_4024_19	vegan > omnivore	2.07995	0.00581
k141_4024_19	vegetarian > omnivore	1.25445	0.00573
k141_4024_25	vegetarian > omnivore	1.07809	0.00573

Gene ID	Condition Pair	log2FC	FDR P-value
k141_4024_19	vegan > omnivore	1.12424	0.00357
k141_4024_30	vegan > omnivore	2.73976	0.00357

Gene ID	Condition Pair	log2FC	FDR P-value
k141_4024_19	UC > CD	2.48856	0.00008
k141_4024_19	nonIBD > CD	2.35721	0.00027
k141_4024_22	nonIBD > CD	3.03863	0.00027
k141_4024_24	UC > CD	19.91219	0.00008
k141_4024_24	nonIBD > CD	19.76030	0.00027
k141_4024_25	UC > CD	18.15898	0.00008
k141_4024_25	nonIBD > CD	16.80010	0.00027
k141_4024_28	UC > CD	1.17592	0.00008
k141_4024_28	nonIBD > CD	1.26145	0.00027
k141_4024_29	UC > CD	3.99208	0.00008
k141_4024_29	nonIBD > CD	4.92846	0.00027