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Cluster: CGMR037040_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_25353 k141_25353_19 16470 17513 + GH3
pfam k141_25353 k141_25353_20 17510 18682 + MTS | tRNA_U5-meth_tr | Methyltransf_25 | Methyltransf_31
pfam k141_25353 k141_25353_21 18709 19332 + DNA_alkylation | HEAT_2
TC k141_25353 k141_25353_22 19354 20187 - 3.A.1.15.4
TC k141_25353 k141_25353_23 20180 21031 - 3.A.1.15.4
TC k141_25353 k141_25353_24 21035 21931 - 3.A.1.15.4
TC k141_25353 k141_25353_25 21931 22812 - 3.A.1.15.4
Gene ID: k141_25353_19
Type: CAZyme
Location: 16470 - 17513 (+)
Gene ID: k141_25353_20
Type: pfam
Location: 17510 - 18682 (+)
Gene ID: k141_25353_21
Type: pfam
Location: 18709 - 19332 (+)
Gene ID: k141_25353_22
Type: TC
Location: 19354 - 20187 (-)
Gene ID: k141_25353_23
Type: TC
Location: 20180 - 21031 (-)
Gene ID: k141_25353_24
Type: TC
Location: 21035 - 21931 (-)
Gene ID: k141_25353_25
Type: TC
Location: 21931 - 22812 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_25353_20 vegan > omnivore 1.29955 0.00581
k141_25353_21 vegan > omnivore 1.08660 0.00581
k141_25353_21 vegetarian > omnivore 2.69831 0.00573
k141_25353_21 vegetarian > vegan 1.61171 0.04474
k141_25353_22 vegan > omnivore 2.37520 0.00581
k141_25353_22 vegetarian > omnivore 1.42578 0.00573
k141_25353_23 vegan > omnivore 2.39837 0.00581
k141_25353_23 vegetarian > omnivore 1.62263 0.00573

🧭 Explore Read Mapping of CGC

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