Cluster: CGMR037040_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR037040
- CGC Family ID: CGCFAM_08547
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_11436 | k141_11436_1 | 1 | 1173 | + | 1.B.40.2.2 |
| CAZyme | k141_11436 | k141_11436_2 | 1329 | 2153 | + | GT8 |
| CAZyme | k141_11436 | k141_11436_3 | 2185 | 3162 | - | GT2 |
| CAZyme | k141_11436 | k141_11436_4 | 3198 | 4325 | - | GT2 |
| NULL(UNKNOWN) | k141_11436 | k141_11436_5 | 4390 | 4890 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_11436 | k141_11436_6 | 4916 | 6325 | - | 1.B.76.1.8 |
Gene ID: k141_11436_1
Type: TC
Location: 1 - 1173 (+)
Type: TC
Location: 1 - 1173 (+)
Gene ID: k141_11436_2
Type: CAZyme
Location: 1329 - 2153 (+)
Type: CAZyme
Location: 1329 - 2153 (+)
Gene ID: k141_11436_3
Type: CAZyme
Location: 2185 - 3162 (-)
Type: CAZyme
Location: 2185 - 3162 (-)
Gene ID: k141_11436_4
Type: CAZyme
Location: 3198 - 4325 (-)
Type: CAZyme
Location: 3198 - 4325 (-)
Gene ID: k141_11436_5
Type:
Location: 4390 - 4890 (-)
Type:
Location: 4390 - 4890 (-)
Gene ID: k141_11436_6
Type: TC
Location: 4916 - 6325 (-)
Type: TC
Location: 4916 - 6325 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.