Cluster: CGMR037017_CGC27
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR037017
- CGC Family ID: CGCFAM_01226
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_214961 | k141_214961_20 | 23610 | 24509 | - | 9.B.126.2.5 |
| pfam | k141_214961 | k141_214961_21 | 24533 | 25645 | - | Epimerase_2 |
| CAZyme | k141_214961 | k141_214961_22 | 25880 | 26827 | + | GT2 |
| pfam | k141_214961 | k141_214961_23 | 26829 | 27266 | + | GtrA_DPMS_TM |
| NULL(UNKNOWN) | k141_214961 | k141_214961_24 | 27272 | 27418 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_214961 | k141_214961_25 | 27494 | 28159 | - | 3.A.1.3.28 |
| TC | k141_214961 | k141_214961_26 | 28172 | 29011 | - | 3.A.1.3.14 |
| TC | k141_214961 | k141_214961_27 | 29315 | 30688 | + | 2.A.2.3.3 |
| TC | k141_214961 | k141_214961_28 | 30924 | 32213 | - | 3.A.18.1.1 |
| pfam | k141_214961 | k141_214961_29 | 32238 | 33239 | - | GFO_IDH_MocA | GFO_IDH_MocA_C3 |
| pfam | k141_214961 | k141_214961_30 | 33365 | 33733 | + | DUF4828 |
| CAZyme | k141_214961 | k141_214961_31 | 33785 | 34543 | - | GH25 |
| TF | k141_214961 | k141_214961_32 | 34582 | 35427 | - | HTH_6 |
| pfam | k141_214961 | k141_214961_33 | 35726 | 37288 | + | FGGY_N | FGGY_C |
| TC | k141_214961 | k141_214961_34 | 37323 | 38684 | + | 2.A.8.1.1 |
| TC | k141_214961 | k141_214961_35 | 38923 | 39465 | - | 3.A.1.25.4 |
Gene ID: k141_214961_20
Type: TC
Location: 23610 - 24509 (-)
Type: TC
Location: 23610 - 24509 (-)
Gene ID: k141_214961_21
Type: pfam
Location: 24533 - 25645 (-)
Type: pfam
Location: 24533 - 25645 (-)
Gene ID: k141_214961_22
Type: CAZyme
Location: 25880 - 26827 (+)
Type: CAZyme
Location: 25880 - 26827 (+)
Gene ID: k141_214961_23
Type: pfam
Location: 26829 - 27266 (+)
Type: pfam
Location: 26829 - 27266 (+)
Gene ID: k141_214961_24
Type:
Location: 27272 - 27418 (+)
Type:
Location: 27272 - 27418 (+)
Gene ID: k141_214961_25
Type: TC
Location: 27494 - 28159 (-)
Type: TC
Location: 27494 - 28159 (-)
Gene ID: k141_214961_26
Type: TC
Location: 28172 - 29011 (-)
Type: TC
Location: 28172 - 29011 (-)
Gene ID: k141_214961_27
Type: TC
Location: 29315 - 30688 (+)
Type: TC
Location: 29315 - 30688 (+)
Gene ID: k141_214961_28
Type: TC
Location: 30924 - 32213 (-)
Type: TC
Location: 30924 - 32213 (-)
Gene ID: k141_214961_29
Type: pfam
Location: 32238 - 33239 (-)
Type: pfam
Location: 32238 - 33239 (-)
Gene ID: k141_214961_30
Type: pfam
Location: 33365 - 33733 (+)
Type: pfam
Location: 33365 - 33733 (+)
Gene ID: k141_214961_31
Type: CAZyme
Location: 33785 - 34543 (-)
Type: CAZyme
Location: 33785 - 34543 (-)
Gene ID: k141_214961_32
Type: TF
Location: 34582 - 35427 (-)
Type: TF
Location: 34582 - 35427 (-)
Gene ID: k141_214961_33
Type: pfam
Location: 35726 - 37288 (+)
Type: pfam
Location: 35726 - 37288 (+)
Gene ID: k141_214961_34
Type: TC
Location: 37323 - 38684 (+)
Type: TC
Location: 37323 - 38684 (+)
Gene ID: k141_214961_35
Type: TC
Location: 38923 - 39465 (-)
Type: TC
Location: 38923 - 39465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lentilactobacillus
Species
Lentilactobacillus buchneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.