Cluster: CGMR036809_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR036809
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8104 | k141_8104_3 | 1310 | 5596 | + | CBM48 | GH13_9 | GH77 |
| CAZyme | k141_8104 | k141_8104_4 | 5742 | 7733 | + | CBM48 | GH13_11 |
| CAZyme | k141_8104 | k141_8104_5 | 8048 | 10528 | + | GT35 |
| TC | k141_8104 | k141_8104_6 | 10658 | 12151 | - | 9.B.24.1.4 |
| pfam | k141_8104 | k141_8104_7 | 12264 | 13196 | - | HphA_C |
| TC | k141_8104 | k141_8104_8 | 13356 | 16970 | - | 1.B.14.7.3 |
Gene ID: k141_8104_3
Type: CAZyme
Location: 1310 - 5596 (+)
Type: CAZyme
Location: 1310 - 5596 (+)
Gene ID: k141_8104_4
Type: CAZyme
Location: 5742 - 7733 (+)
Type: CAZyme
Location: 5742 - 7733 (+)
Gene ID: k141_8104_5
Type: CAZyme
Location: 8048 - 10528 (+)
Type: CAZyme
Location: 8048 - 10528 (+)
Gene ID: k141_8104_6
Type: TC
Location: 10658 - 12151 (-)
Type: TC
Location: 10658 - 12151 (-)
Gene ID: k141_8104_7
Type: pfam
Location: 12264 - 13196 (-)
Type: pfam
Location: 12264 - 13196 (-)
Gene ID: k141_8104_8
Type: TC
Location: 13356 - 16970 (-)
Type: TC
Location: 13356 - 16970 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria flavescens_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.