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Cluster: CGMR036809_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1044 k141_1044_2 1562 2221 - 2.A.95.1.7
TC k141_1044 k141_1044_3 2223 3371 - 2.A.103.1.2
peptidase k141_1044 k141_1044_4 3364 5412 - X52.001
pfam k141_1044 k141_1044_5 5417 5917 - MreD
TC k141_1044 k141_1044_6 5922 6764 - 9.B.157.1.3
TC k141_1044 k141_1044_7 6776 7813 - 9.B.157.1.3
pfam k141_1044 k141_1044_8 8038 8328 + GatC
pfam k141_1044 k141_1044_9 8479 9927 + Amidase
TC k141_1044 k141_1044_10 10026 10646 + 1.A.62.2.1
pfam k141_1044 k141_1044_11 10746 12176 + GatB_Yqey | GatB_N
TC k141_1044 k141_1044_12 12217 13260 + 5.B.1.3.1
TC k141_1044 k141_1044_13 13636 14925 + 5.B.1.6.1
CAZyme k141_1044 k141_1044_14 15278 17386 - GH23
Gene ID: k141_1044_2
Type: TC
Location: 1562 - 2221 (-)
Gene ID: k141_1044_3
Type: TC
Location: 2223 - 3371 (-)
Gene ID: k141_1044_4
Type: peptidase
Location: 3364 - 5412 (-)
Gene ID: k141_1044_5
Type: pfam
Location: 5417 - 5917 (-)
Gene ID: k141_1044_6
Type: TC
Location: 5922 - 6764 (-)
Gene ID: k141_1044_7
Type: TC
Location: 6776 - 7813 (-)
Gene ID: k141_1044_8
Type: pfam
Location: 8038 - 8328 (+)
Gene ID: k141_1044_9
Type: pfam
Location: 8479 - 9927 (+)
Gene ID: k141_1044_10
Type: TC
Location: 10026 - 10646 (+)
Gene ID: k141_1044_11
Type: pfam
Location: 10746 - 12176 (+)
Gene ID: k141_1044_12
Type: TC
Location: 12217 - 13260 (+)
Gene ID: k141_1044_13
Type: TC
Location: 13636 - 14925 (+)
Gene ID: k141_1044_14
Type: CAZyme
Location: 15278 - 17386 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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