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Cluster: CGMR036809_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14969 k141_14969_78 88700 91150 - 3.A.7.2.1
pfam k141_14969 k141_14969_79 91214 91420 - VirB3
pfam k141_14969 k141_14969_80 91529 91918 - TrbC
CAZyme k141_14969 k141_14969_81 91970 92614 - GH23
NULL(UNKNOWN) k141_14969 k141_14969_82 92783 93247 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_14969 k141_14969_83 93259 94161 + 3.A.7.3.1
pfam k141_14969 k141_14969_84 94161 94886 + CagX
TC k141_14969 k141_14969_85 94889 96037 + 3.A.7.3.1
TC k141_14969 k141_14969_86 96381 98072 + 3.A.7.5.1
NULL(UNKNOWN) k141_14969 k141_14969_87 98232 98777 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_14969 k141_14969_88 98796 100493 + HemolysinCabind | HemolysinCabind
TC k141_14969 k141_14969_89 100578 101597 + 3.A.7.3.1
Gene ID: k141_14969_78
Type: TC
Location: 88700 - 91150 (-)
Gene ID: k141_14969_79
Type: pfam
Location: 91214 - 91420 (-)
Gene ID: k141_14969_80
Type: pfam
Location: 91529 - 91918 (-)
Gene ID: k141_14969_81
Type: CAZyme
Location: 91970 - 92614 (-)
Gene ID: k141_14969_82
Type:
Location: 92783 - 93247 (+)
Gene ID: k141_14969_83
Type: TC
Location: 93259 - 94161 (+)
Gene ID: k141_14969_84
Type: pfam
Location: 94161 - 94886 (+)
Gene ID: k141_14969_85
Type: TC
Location: 94889 - 96037 (+)
Gene ID: k141_14969_86
Type: TC
Location: 96381 - 98072 (+)
Gene ID: k141_14969_87
Type:
Location: 98232 - 98777 (+)
Gene ID: k141_14969_88
Type: pfam
Location: 98796 - 100493 (+)
Gene ID: k141_14969_89
Type: TC
Location: 100578 - 101597 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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