Cluster: CGMR036809_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR036809
- CGC Family ID: CGCFAM_05535
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_14969 | k141_14969_52 | 63839 | 64801 | - | 8.A.21.2.2 |
| NULL(UNKNOWN) | k141_14969 | k141_14969_53 | 64811 | 65236 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_14969 | k141_14969_54 | 65363 | 66022 | + | UDG |
| TC | k141_14969 | k141_14969_55 | 66077 | 67150 | - | 3.A.1.6.1 |
| TC | k141_14969 | k141_14969_56 | 67147 | 68007 | - | 3.A.1.6.1 |
| TC | k141_14969 | k141_14969_57 | 68092 | 68928 | - | 3.A.1.6.1 |
| pfam | k141_14969 | k141_14969_58 | 69089 | 69538 | - | DUF4124 |
| NULL(UNKNOWN) | k141_14969 | k141_14969_59 | 69551 | 69826 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_14969 | k141_14969_60 | 69916 | 71544 | + | 3.A.1.121.4 |
| NULL(UNKNOWN) | k141_14969 | k141_14969_61 | 71554 | 71814 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_14969 | k141_14969_62 | 72137 | 74578 | + | GH87 |
Gene ID: k141_14969_52
Type: TC
Location: 63839 - 64801 (-)
Type: TC
Location: 63839 - 64801 (-)
Gene ID: k141_14969_53
Type:
Location: 64811 - 65236 (-)
Type:
Location: 64811 - 65236 (-)
Gene ID: k141_14969_54
Type: pfam
Location: 65363 - 66022 (+)
Type: pfam
Location: 65363 - 66022 (+)
Gene ID: k141_14969_55
Type: TC
Location: 66077 - 67150 (-)
Type: TC
Location: 66077 - 67150 (-)
Gene ID: k141_14969_56
Type: TC
Location: 67147 - 68007 (-)
Type: TC
Location: 67147 - 68007 (-)
Gene ID: k141_14969_57
Type: TC
Location: 68092 - 68928 (-)
Type: TC
Location: 68092 - 68928 (-)
Gene ID: k141_14969_58
Type: pfam
Location: 69089 - 69538 (-)
Type: pfam
Location: 69089 - 69538 (-)
Gene ID: k141_14969_59
Type:
Location: 69551 - 69826 (-)
Type:
Location: 69551 - 69826 (-)
Gene ID: k141_14969_60
Type: TC
Location: 69916 - 71544 (+)
Type: TC
Location: 69916 - 71544 (+)
Gene ID: k141_14969_61
Type:
Location: 71554 - 71814 (+)
Type:
Location: 71554 - 71814 (+)
Gene ID: k141_14969_62
Type: CAZyme
Location: 72137 - 74578 (+)
Type: CAZyme
Location: 72137 - 74578 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Neisseriaceae
Genus
Neisseria
Species
Neisseria flavescens_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.