Cluster: CGMR036730_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR036730
- CGC Family ID: CGCFAM_01063
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_79938 | k141_79938_1 | 3 | 836 | - | GH23 |
| pfam | k141_79938 | k141_79938_2 | 1332 | 2240 | + | ATP_bind_3 |
| pfam | k141_79938 | k141_79938_3 | 2466 | 2849 | + | SCP2 |
| CAZyme | k141_79938 | k141_79938_4 | 3008 | 4117 | - | GH23 |
| pfam | k141_79938 | k141_79938_5 | 4682 | 5176 | + | GreA_GreB | GreA_GreB_N |
| TC | k141_79938 | k141_79938_6 | 5601 | 6860 | - | 1.A.23.4.5 |
Gene ID: k141_79938_1
Type: CAZyme
Location: 3 - 836 (-)
Type: CAZyme
Location: 3 - 836 (-)
Gene ID: k141_79938_2
Type: pfam
Location: 1332 - 2240 (+)
Type: pfam
Location: 1332 - 2240 (+)
Gene ID: k141_79938_3
Type: pfam
Location: 2466 - 2849 (+)
Type: pfam
Location: 2466 - 2849 (+)
Gene ID: k141_79938_4
Type: CAZyme
Location: 3008 - 4117 (-)
Type: CAZyme
Location: 3008 - 4117 (-)
Gene ID: k141_79938_5
Type: pfam
Location: 4682 - 5176 (+)
Type: pfam
Location: 4682 - 5176 (+)
Gene ID: k141_79938_6
Type: TC
Location: 5601 - 6860 (-)
Type: TC
Location: 5601 - 6860 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Acinetobacter
Species
Acinetobacter bereziniae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.