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Cluster: CGMR036730_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_100734 k141_100734_14 13266 16553 + GH23
TC k141_100734 k141_100734_15 16631 18469 + 3.A.1.5.21
TC k141_100734 k141_100734_16 18584 19654 + 3.A.1.5.21
TC k141_100734 k141_100734_17 19654 20670 + 3.A.1.5.21
TC k141_100734 k141_100734_18 20642 22240 + 3.A.1.5.21
pfam k141_100734 k141_100734_19 22374 23618 + Oxidored_FMN
NULL(UNKNOWN) k141_100734 k141_100734_20 23825 23959 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_100734 k141_100734_21 23952 24266 - 2.A.1.11.2
Gene ID: k141_100734_14
Type: CAZyme
Location: 13266 - 16553 (+)
Gene ID: k141_100734_15
Type: TC
Location: 16631 - 18469 (+)
Gene ID: k141_100734_16
Type: TC
Location: 18584 - 19654 (+)
Gene ID: k141_100734_17
Type: TC
Location: 19654 - 20670 (+)
Gene ID: k141_100734_18
Type: TC
Location: 20642 - 22240 (+)
Gene ID: k141_100734_19
Type: pfam
Location: 22374 - 23618 (+)
Gene ID: k141_100734_20
Type:
Location: 23825 - 23959 (-)
Gene ID: k141_100734_21
Type: TC
Location: 23952 - 24266 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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