Cluster: CGMR036481_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR036481
- CGC Family ID: CGCFAM_00817
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_116245 | k141_116245_3 | 2673 | 4088 | + | GH32 |
| STP | k141_116245 | k141_116245_4 | 4145 | 5494 | + | SBP_bac_1 |
| TC | k141_116245 | k141_116245_5 | 5562 | 6440 | + | 3.A.1.1.21 |
| TC | k141_116245 | k141_116245_6 | 6442 | 7374 | + | 3.A.1.1.25 |
| TF | k141_116245 | k141_116245_7 | 7379 | 8401 | + | LacI |
| CAZyme | k141_116245 | k141_116245_8 | 8453 | 10045 | + | GH32 |
| CAZyme | k141_116245 | k141_116245_9 | 10042 | 10959 | + | GH32 |
Gene ID: k141_116245_3
Type: CAZyme
Location: 2673 - 4088 (+)
Type: CAZyme
Location: 2673 - 4088 (+)
Gene ID: k141_116245_4
Type: STP
Location: 4145 - 5494 (+)
Type: STP
Location: 4145 - 5494 (+)
Gene ID: k141_116245_5
Type: TC
Location: 5562 - 6440 (+)
Type: TC
Location: 5562 - 6440 (+)
Gene ID: k141_116245_6
Type: TC
Location: 6442 - 7374 (+)
Type: TC
Location: 6442 - 7374 (+)
Gene ID: k141_116245_7
Type: TF
Location: 7379 - 8401 (+)
Type: TF
Location: 7379 - 8401 (+)
Gene ID: k141_116245_8
Type: CAZyme
Location: 8453 - 10045 (+)
Type: CAZyme
Location: 8453 - 10045 (+)
Gene ID: k141_116245_9
Type: CAZyme
Location: 10042 - 10959 (+)
Type: CAZyme
Location: 10042 - 10959 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinomyces
Species
Actinomyces radicidentis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.