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Cluster: CGMR036402_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_32655 k141_32655_6 7670 9979 + GH20
NULL(UNKNOWN) k141_32655 k141_32655_7 10156 10647 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_32655 k141_32655_8 10672 10893 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_32655 k141_32655_9 10880 12310 - 2.A.114.1.4
pfam k141_32655 k141_32655_10 12392 14071 + GHL10 | DUF4015
TF k141_32655 k141_32655_11 14096 14980 - HTH_AraC | HTH_AraC
TC k141_32655 k141_32655_12 15139 16425 + 2.A.1.1.3
pfam k141_32655 k141_32655_13 16433 19705 + TPR_8 | TPR_8 | DUF5107
CAZyme k141_32655 k141_32655_14 19726 22527 + GH2
TF k141_32655 k141_32655_15 22646 23521 + HTH_AraC | HTH_AraC
CAZyme k141_32655 k141_32655_16 23630 26374 + GH2
CAZyme k141_32655 k141_32655_17 26404 28719 + GH3
Gene ID: k141_32655_6
Type: CAZyme
Location: 7670 - 9979 (+)
Gene ID: k141_32655_7
Type:
Location: 10156 - 10647 (-)
Gene ID: k141_32655_8
Type:
Location: 10672 - 10893 (-)
Gene ID: k141_32655_9
Type: TC
Location: 10880 - 12310 (-)
Gene ID: k141_32655_10
Type: pfam
Location: 12392 - 14071 (+)
Gene ID: k141_32655_11
Type: TF
Location: 14096 - 14980 (-)
Gene ID: k141_32655_12
Type: TC
Location: 15139 - 16425 (+)
Gene ID: k141_32655_13
Type: pfam
Location: 16433 - 19705 (+)
Gene ID: k141_32655_14
Type: CAZyme
Location: 19726 - 22527 (+)
Gene ID: k141_32655_15
Type: TF
Location: 22646 - 23521 (+)
Gene ID: k141_32655_16
Type: CAZyme
Location: 23630 - 26374 (+)
Gene ID: k141_32655_17
Type: CAZyme
Location: 26404 - 28719 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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