Cluster: CGMR036402_CGC61
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_47550 | k141_47550_73 | 84467 | 85372 | + | GT2 |
| CAZyme | k141_47550 | k141_47550_74 | 85369 | 86496 | + | GT2 |
| CAZyme | k141_47550 | k141_47550_75 | 86503 | 87666 | + | GT2 |
| pfam | k141_47550 | k141_47550_76 | 87669 | 88283 | + | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | k141_47550 | k141_47550_77 | 88290 | 89114 | + | GT111 |
| CAZyme | k141_47550 | k141_47550_78 | 89118 | 90083 | + | GT2 |
| NULL(UNKNOWN) | k141_47550 | k141_47550_79 | 90168 | 90998 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_47550 | k141_47550_80 | 91003 | 92313 | - | 3.A.1.103.5 |
| CAZyme | k141_47550 | k141_47550_81 | 92365 | 93216 | - | GT2 |
| CAZyme | k141_47550 | k141_47550_82 | 93219 | 94139 | - | GT2 |
| TC | k141_47550 | k141_47550_83 | 94223 | 95101 | - | 3.A.1.103.5 |
| CAZyme | k141_47550 | k141_47550_84 | 95077 | 96246 | - | GT4 |
Gene ID: k141_47550_73
Type: CAZyme
Location: 84467 - 85372 (+)
Type: CAZyme
Location: 84467 - 85372 (+)
Gene ID: k141_47550_74
Type: CAZyme
Location: 85369 - 86496 (+)
Type: CAZyme
Location: 85369 - 86496 (+)
Gene ID: k141_47550_75
Type: CAZyme
Location: 86503 - 87666 (+)
Type: CAZyme
Location: 86503 - 87666 (+)
Gene ID: k141_47550_76
Type: pfam
Location: 87669 - 88283 (+)
Type: pfam
Location: 87669 - 88283 (+)
Gene ID: k141_47550_77
Type: CAZyme
Location: 88290 - 89114 (+)
Type: CAZyme
Location: 88290 - 89114 (+)
Gene ID: k141_47550_78
Type: CAZyme
Location: 89118 - 90083 (+)
Type: CAZyme
Location: 89118 - 90083 (+)
Gene ID: k141_47550_79
Type:
Location: 90168 - 90998 (-)
Type:
Location: 90168 - 90998 (-)
Gene ID: k141_47550_80
Type: TC
Location: 91003 - 92313 (-)
Type: TC
Location: 91003 - 92313 (-)
Gene ID: k141_47550_81
Type: CAZyme
Location: 92365 - 93216 (-)
Type: CAZyme
Location: 92365 - 93216 (-)
Gene ID: k141_47550_82
Type: CAZyme
Location: 93219 - 94139 (-)
Type: CAZyme
Location: 93219 - 94139 (-)
Gene ID: k141_47550_83
Type: TC
Location: 94223 - 95101 (-)
Type: TC
Location: 94223 - 95101 (-)
Gene ID: k141_47550_84
Type: CAZyme
Location: 95077 - 96246 (-)
Type: CAZyme
Location: 95077 - 96246 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.