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Cluster: CGMR036402_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_113597 k141_113597_20 26238 27029 + 9.B.14.3.3
NULL(UNKNOWN) k141_113597 k141_113597_21 27047 27157 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_113597 k141_113597_22 27541 28095 + HTH_3
TC k141_113597 k141_113597_23 28107 29759 + 2.A.1.42.2
pfam k141_113597 k141_113597_24 29805 30272 + DHOase
CAZyme k141_113597 k141_113597_25 30437 31828 - GH29
pfam k141_113597 k141_113597_26 32023 33783 - SusD_RagB | SusD-like_3
TC k141_113597 k141_113597_27 33798 36974 - 1.B.14.6.1
Gene ID: k141_113597_20
Type: TC
Location: 26238 - 27029 (+)
Gene ID: k141_113597_21
Type:
Location: 27047 - 27157 (+)
Gene ID: k141_113597_22
Type: TF
Location: 27541 - 28095 (+)
Gene ID: k141_113597_23
Type: TC
Location: 28107 - 29759 (+)
Gene ID: k141_113597_24
Type: pfam
Location: 29805 - 30272 (+)
Gene ID: k141_113597_25
Type: CAZyme
Location: 30437 - 31828 (-)
Gene ID: k141_113597_26
Type: pfam
Location: 32023 - 33783 (-)
Gene ID: k141_113597_27
Type: TC
Location: 33798 - 36974 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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