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Cluster: CGMR036402_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18283 k141_18283_40 40300 40995 - 2.A.122.1.1
TC k141_18283 k141_18283_41 40976 41329 - 1.E.14.1.13
pfam k141_18283 k141_18283_42 41531 42544 + PTA_PTB
pfam k141_18283 k141_18283_43 42565 43764 + Acetate_kinase
CAZyme k141_18283 k141_18283_44 43843 46020 - GH36
pfam k141_18283 k141_18283_45 46055 46822 - Metallophos
pfam k141_18283 k141_18283_46 46827 47147 - FeS_assembly_P
CAZyme k141_18283 k141_18283_47 47343 48545 + GH88
pfam k141_18283 k141_18283_48 48620 49309 - RadC | UPF0758_N
CAZyme k141_18283 k141_18283_49 49309 50298 - GT2
Gene ID: k141_18283_40
Type: TC
Location: 40300 - 40995 (-)
Gene ID: k141_18283_41
Type: TC
Location: 40976 - 41329 (-)
Gene ID: k141_18283_42
Type: pfam
Location: 41531 - 42544 (+)
Gene ID: k141_18283_43
Type: pfam
Location: 42565 - 43764 (+)
Gene ID: k141_18283_44
Type: CAZyme
Location: 43843 - 46020 (-)
Gene ID: k141_18283_45
Type: pfam
Location: 46055 - 46822 (-)
Gene ID: k141_18283_46
Type: pfam
Location: 46827 - 47147 (-)
Gene ID: k141_18283_47
Type: CAZyme
Location: 47343 - 48545 (+)
Gene ID: k141_18283_48
Type: pfam
Location: 48620 - 49309 (-)
Gene ID: k141_18283_49
Type: CAZyme
Location: 49309 - 50298 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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