Cluster: CGMR036402_CGC48
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_02284
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_120194 | k141_120194_1 | 225 | 2330 | - | GH2 |
| CAZyme | k141_120194 | k141_120194_2 | 2367 | 3485 | - | GH105 |
| CAZyme | k141_120194 | k141_120194_3 | 3494 | 4936 | - | GH29 |
| pfam | k141_120194 | k141_120194_4 | 5130 | 7064 | - | SusD_RagB | SusD-like_3 |
| TC | k141_120194 | k141_120194_5 | 7084 | 10533 | - | 1.B.14.6.1 |
| STP | k141_120194 | k141_120194_6 | 10701 | 11714 | - | FecR |
| TF | k141_120194 | k141_120194_7 | 11792 | 12337 | - | GerE |
| CAZyme | k141_120194 | k141_120194_8 | 12452 | 13672 | - | GT30 |
Gene ID: k141_120194_1
Type: CAZyme
Location: 225 - 2330 (-)
Type: CAZyme
Location: 225 - 2330 (-)
Gene ID: k141_120194_2
Type: CAZyme
Location: 2367 - 3485 (-)
Type: CAZyme
Location: 2367 - 3485 (-)
Gene ID: k141_120194_3
Type: CAZyme
Location: 3494 - 4936 (-)
Type: CAZyme
Location: 3494 - 4936 (-)
Gene ID: k141_120194_4
Type: pfam
Location: 5130 - 7064 (-)
Type: pfam
Location: 5130 - 7064 (-)
Gene ID: k141_120194_5
Type: TC
Location: 7084 - 10533 (-)
Type: TC
Location: 7084 - 10533 (-)
Gene ID: k141_120194_6
Type: STP
Location: 10701 - 11714 (-)
Type: STP
Location: 10701 - 11714 (-)
Gene ID: k141_120194_7
Type: TF
Location: 11792 - 12337 (-)
Type: TF
Location: 11792 - 12337 (-)
Gene ID: k141_120194_8
Type: CAZyme
Location: 12452 - 13672 (-)
Type: CAZyme
Location: 12452 - 13672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.