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Cluster: CGMR036402_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_17917 k141_17917_4 2393 5794 + 1.B.14.6.1
pfam k141_17917 k141_17917_5 5820 7313 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_17917 k141_17917_6 7418 8557 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_17917 k141_17917_7 8594 10192 + GH27
NULL(UNKNOWN) k141_17917 k141_17917_8 10206 12590 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_17917 k141_17917_9 12604 15756 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_17917 k141_17917_10 15790 17943 + GH89
CAZyme k141_17917 k141_17917_11 18480 20759 + GH95
pfam k141_17917 k141_17917_12 20961 21521 - Formyl_trans_N
TC k141_17917 k141_17917_13 21674 21910 + 3.D.1.6.4
Gene ID: k141_17917_4
Type: TC
Location: 2393 - 5794 (+)
Gene ID: k141_17917_5
Type: pfam
Location: 5820 - 7313 (+)
Gene ID: k141_17917_6
Type:
Location: 7418 - 8557 (+)
Gene ID: k141_17917_7
Type: CAZyme
Location: 8594 - 10192 (+)
Gene ID: k141_17917_8
Type:
Location: 10206 - 12590 (+)
Gene ID: k141_17917_9
Type:
Location: 12604 - 15756 (+)
Gene ID: k141_17917_10
Type: CAZyme
Location: 15790 - 17943 (+)
Gene ID: k141_17917_11
Type: CAZyme
Location: 18480 - 20759 (+)
Gene ID: k141_17917_12
Type: pfam
Location: 20961 - 21521 (-)
Gene ID: k141_17917_13
Type: TC
Location: 21674 - 21910 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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