Cluster: CGMR036402_CGC39
🧬 Cluster Details
- Gene Count: 25
- CAZyme Count: 12
- Substrate: host glycan
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_00194
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_116711 | k141_116711_13 | 14122 | 15282 | - | GH171 |
| STP | k141_116711 | k141_116711_14 | 15337 | 15873 | + | HD |
| NULL(UNKNOWN) | k141_116711 | k141_116711_15 | 16021 | 16479 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_116711 | k141_116711_16 | 16803 | 19532 | + | 1.B.42.1.8 |
| pfam | k141_116711 | k141_116711_17 | 19547 | 20209 | - | UDG |
| pfam | k141_116711 | k141_116711_18 | 20323 | 21363 | - | AsnA |
| TC | k141_116711 | k141_116711_19 | 21949 | 25206 | + | 1.B.14.6.1 |
| TC | k141_116711 | k141_116711_20 | 25236 | 26750 | + | 8.A.46.1.4 |
| CAZyme | k141_116711 | k141_116711_21 | 26878 | 28518 | + | CBM93 | GH33 |
| CAZyme | k141_116711 | k141_116711_22 | 28549 | 30528 | + | GH20 |
| sulfatase | k141_116711 | k141_116711_23 | 30530 | 31195 | + | S1_16 |
| CAZyme | k141_116711 | k141_116711_24 | 31192 | 33261 | + | CE20 |
| CAZyme | k141_116711 | k141_116711_25 | 33314 | 35911 | + | GH2 |
| CAZyme | k141_116711 | k141_116711_26 | 35929 | 38253 | + | GH20 |
| pfam | k141_116711 | k141_116711_27 | 38270 | 39409 | + | Kelch_1 | Kelch_2 | Kelch_6 | NANM | NANM |
| CAZyme | k141_116711 | k141_116711_28 | 39406 | 41466 | + | GH20 |
| CAZyme | k141_116711 | k141_116711_29 | 41473 | 43725 | + | GH92 |
| CAZyme | k141_116711 | k141_116711_30 | 43734 | 46238 | + | GH2 |
| CAZyme | k141_116711 | k141_116711_31 | 46415 | 47578 | + | CE9 |
| pfam | k141_116711 | k141_116711_32 | 47789 | 48982 | + | DUF4934 | DUF5128 |
| pfam | k141_116711 | k141_116711_33 | 49357 | 50127 | + | DUF2400 |
| CAZyme | k141_116711 | k141_116711_34 | 50129 | 52048 | - | GH97 |
| CAZyme | k141_116711 | k141_116711_35 | 52072 | 54882 | - | CBM51 |
| pfam | k141_116711 | k141_116711_36 | 55186 | 56862 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | k141_116711 | k141_116711_37 | 56884 | 60282 | - | 1.B.14.6.1 |
Gene ID: k141_116711_13
Type: CAZyme
Location: 14122 - 15282 (-)
Type: CAZyme
Location: 14122 - 15282 (-)
Gene ID: k141_116711_14
Type: STP
Location: 15337 - 15873 (+)
Type: STP
Location: 15337 - 15873 (+)
Gene ID: k141_116711_15
Type:
Location: 16021 - 16479 (-)
Type:
Location: 16021 - 16479 (-)
Gene ID: k141_116711_16
Type: TC
Location: 16803 - 19532 (+)
Type: TC
Location: 16803 - 19532 (+)
Gene ID: k141_116711_17
Type: pfam
Location: 19547 - 20209 (-)
Type: pfam
Location: 19547 - 20209 (-)
Gene ID: k141_116711_18
Type: pfam
Location: 20323 - 21363 (-)
Type: pfam
Location: 20323 - 21363 (-)
Gene ID: k141_116711_19
Type: TC
Location: 21949 - 25206 (+)
Type: TC
Location: 21949 - 25206 (+)
Gene ID: k141_116711_20
Type: TC
Location: 25236 - 26750 (+)
Type: TC
Location: 25236 - 26750 (+)
Gene ID: k141_116711_21
Type: CAZyme
Location: 26878 - 28518 (+)
Type: CAZyme
Location: 26878 - 28518 (+)
Gene ID: k141_116711_22
Type: CAZyme
Location: 28549 - 30528 (+)
Type: CAZyme
Location: 28549 - 30528 (+)
Gene ID: k141_116711_23
Type: sulfatase
Location: 30530 - 31195 (+)
Type: sulfatase
Location: 30530 - 31195 (+)
Gene ID: k141_116711_24
Type: CAZyme
Location: 31192 - 33261 (+)
Type: CAZyme
Location: 31192 - 33261 (+)
Gene ID: k141_116711_25
Type: CAZyme
Location: 33314 - 35911 (+)
Type: CAZyme
Location: 33314 - 35911 (+)
Gene ID: k141_116711_26
Type: CAZyme
Location: 35929 - 38253 (+)
Type: CAZyme
Location: 35929 - 38253 (+)
Gene ID: k141_116711_27
Type: pfam
Location: 38270 - 39409 (+)
Type: pfam
Location: 38270 - 39409 (+)
Gene ID: k141_116711_28
Type: CAZyme
Location: 39406 - 41466 (+)
Type: CAZyme
Location: 39406 - 41466 (+)
Gene ID: k141_116711_29
Type: CAZyme
Location: 41473 - 43725 (+)
Type: CAZyme
Location: 41473 - 43725 (+)
Gene ID: k141_116711_30
Type: CAZyme
Location: 43734 - 46238 (+)
Type: CAZyme
Location: 43734 - 46238 (+)
Gene ID: k141_116711_31
Type: CAZyme
Location: 46415 - 47578 (+)
Type: CAZyme
Location: 46415 - 47578 (+)
Gene ID: k141_116711_32
Type: pfam
Location: 47789 - 48982 (+)
Type: pfam
Location: 47789 - 48982 (+)
Gene ID: k141_116711_33
Type: pfam
Location: 49357 - 50127 (+)
Type: pfam
Location: 49357 - 50127 (+)
Gene ID: k141_116711_34
Type: CAZyme
Location: 50129 - 52048 (-)
Type: CAZyme
Location: 50129 - 52048 (-)
Gene ID: k141_116711_35
Type: CAZyme
Location: 52072 - 54882 (-)
Type: CAZyme
Location: 52072 - 54882 (-)
Gene ID: k141_116711_36
Type: pfam
Location: 55186 - 56862 (-)
Type: pfam
Location: 55186 - 56862 (-)
Gene ID: k141_116711_37
Type: TC
Location: 56884 - 60282 (-)
Type: TC
Location: 56884 - 60282 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.