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Cluster: CGMR036402_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1603 k141_1603_25 22979 23959 - 1.B.57.4.3
peptidase k141_1603 k141_1603_26 23987 25792 - S08.UPA
CAZyme k141_1603 k141_1603_27 25992 28226 - GH3
CAZyme k141_1603 k141_1603_28 28349 29605 - GH5_46
CAZyme k141_1603 k141_1603_29 29619 31862 - GH3
pfam k141_1603 k141_1603_30 31980 33782 - SusD_RagB | SusD-like_3
TC k141_1603 k141_1603_31 33803 36982 - 1.B.14.6.1
pfam k141_1603 k141_1603_32 37225 38682 - ThuA | ThuA
CAZyme k141_1603 k141_1603_33 38675 40075 - PL38
CAZyme k141_1603 k141_1603_34 40099 41148 - CBM57
CAZyme k141_1603 k141_1603_35 41221 42759 - GH2
Gene ID: k141_1603_25
Type: TC
Location: 22979 - 23959 (-)
Gene ID: k141_1603_26
Type: peptidase
Location: 23987 - 25792 (-)
Gene ID: k141_1603_27
Type: CAZyme
Location: 25992 - 28226 (-)
Gene ID: k141_1603_28
Type: CAZyme
Location: 28349 - 29605 (-)
Gene ID: k141_1603_29
Type: CAZyme
Location: 29619 - 31862 (-)
Gene ID: k141_1603_30
Type: pfam
Location: 31980 - 33782 (-)
Gene ID: k141_1603_31
Type: TC
Location: 33803 - 36982 (-)
Gene ID: k141_1603_32
Type: pfam
Location: 37225 - 38682 (-)
Gene ID: k141_1603_33
Type: CAZyme
Location: 38675 - 40075 (-)
Gene ID: k141_1603_34
Type: CAZyme
Location: 40099 - 41148 (-)
Gene ID: k141_1603_35
Type: CAZyme
Location: 41221 - 42759 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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