Cluster: CGMR036402_CGC32
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_00670
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_71053 | k141_71053_64 | 77965 | 79239 | - | 3.A.1.122.2 |
| TC | k141_71053 | k141_71053_65 | 79467 | 80138 | - | 3.A.1.122.2 |
| pfam | k141_71053 | k141_71053_66 | 80302 | 81621 | - | FtsX | MacB_PCD |
| TC | k141_71053 | k141_71053_67 | 81637 | 82941 | - | 3.A.1.122.2 |
| NULL(UNKNOWN) | k141_71053 | k141_71053_68 | 82968 | 83105 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_71053 | k141_71053_69 | 83275 | 84522 | - | HlyD_3 |
| CAZyme | k141_71053 | k141_71053_70 | 84693 | 85586 | - | GH73 |
| TC | k141_71053 | k141_71053_71 | 85590 | 86561 | - | 9.B.1.1.5 |
Gene ID: k141_71053_64
Type: TC
Location: 77965 - 79239 (-)
Type: TC
Location: 77965 - 79239 (-)
Gene ID: k141_71053_65
Type: TC
Location: 79467 - 80138 (-)
Type: TC
Location: 79467 - 80138 (-)
Gene ID: k141_71053_66
Type: pfam
Location: 80302 - 81621 (-)
Type: pfam
Location: 80302 - 81621 (-)
Gene ID: k141_71053_67
Type: TC
Location: 81637 - 82941 (-)
Type: TC
Location: 81637 - 82941 (-)
Gene ID: k141_71053_68
Type:
Location: 82968 - 83105 (-)
Type:
Location: 82968 - 83105 (-)
Gene ID: k141_71053_69
Type: pfam
Location: 83275 - 84522 (-)
Type: pfam
Location: 83275 - 84522 (-)
Gene ID: k141_71053_70
Type: CAZyme
Location: 84693 - 85586 (-)
Type: CAZyme
Location: 84693 - 85586 (-)
Gene ID: k141_71053_71
Type: TC
Location: 85590 - 86561 (-)
Type: TC
Location: 85590 - 86561 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.