Cluster: CGMR036402_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_00758
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_71053 | k141_71053_34 | 41106 | 42725 | - | 8.A.46.1.2 |
| TC | k141_71053 | k141_71053_35 | 42746 | 45787 | - | 1.B.14.6.1 |
| CAZyme | k141_71053 | k141_71053_36 | 45862 | 46638 | - | GH16_3 |
Gene ID: k141_71053_34
Type: TC
Location: 41106 - 42725 (-)
Type: TC
Location: 41106 - 42725 (-)
Gene ID: k141_71053_35
Type: TC
Location: 42746 - 45787 (-)
Type: TC
Location: 42746 - 45787 (-)
Gene ID: k141_71053_36
Type: CAZyme
Location: 45862 - 46638 (-)
Type: CAZyme
Location: 45862 - 46638 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_71053_35 | vegan > omnivore | 1.76693 | 0.01054 |
| k141_71053_35 | vegetarian > omnivore | 1.65473 | 0.01878 |