Cluster: CGMR036402_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_114587 | k141_114587_35 | 44701 | 47361 | - | GH35 |
| CAZyme | k141_114587 | k141_114587_36 | 47397 | 50960 | - | GH2 |
| CAZyme | k141_114587 | k141_114587_37 | 50968 | 53640 | - | GH35 |
| CAZyme | k141_114587 | k141_114587_38 | 53655 | 54983 | - | GH29 |
| pfam | k141_114587 | k141_114587_39 | 55190 | 55651 | - | DUF5018-rel |
| pfam | k141_114587 | k141_114587_40 | 55683 | 57665 | - | SusD_RagB | SusD-like_3 |
| TC | k141_114587 | k141_114587_41 | 57672 | 61046 | - | 1.B.14.6.1 |
Gene ID: k141_114587_35
Type: CAZyme
Location: 44701 - 47361 (-)
Type: CAZyme
Location: 44701 - 47361 (-)
Gene ID: k141_114587_36
Type: CAZyme
Location: 47397 - 50960 (-)
Type: CAZyme
Location: 47397 - 50960 (-)
Gene ID: k141_114587_37
Type: CAZyme
Location: 50968 - 53640 (-)
Type: CAZyme
Location: 50968 - 53640 (-)
Gene ID: k141_114587_38
Type: CAZyme
Location: 53655 - 54983 (-)
Type: CAZyme
Location: 53655 - 54983 (-)
Gene ID: k141_114587_39
Type: pfam
Location: 55190 - 55651 (-)
Type: pfam
Location: 55190 - 55651 (-)
Gene ID: k141_114587_40
Type: pfam
Location: 55683 - 57665 (-)
Type: pfam
Location: 55683 - 57665 (-)
Gene ID: k141_114587_41
Type: TC
Location: 57672 - 61046 (-)
Type: TC
Location: 57672 - 61046 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.