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Cluster: CGMR036402_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_85517 k141_85517_11 14776 17079 - GH13_10
pfam k141_85517 k141_85517_12 17152 18600 - SusF_SusE | SusF_N
pfam k141_85517 k141_85517_13 18625 19797 - SusE | SusF_SusE
TC k141_85517 k141_85517_14 19835 21490 - 8.A.46.1.1
TC k141_85517 k141_85517_15 21514 24513 - 1.B.14.6.1
CAZyme k141_85517 k141_85517_16 24619 26835 - GH97
CAZyme k141_85517 k141_85517_17 27042 28892 - GH13_46
pfam k141_85517 k141_85517_18 29134 30729 + DUF6377
TC k141_85517 k141_85517_19 30852 32210 - 2.A.2.6.3
CAZyme k141_85517 k141_85517_20 32225 34903 - GH77
Gene ID: k141_85517_11
Type: CAZyme
Location: 14776 - 17079 (-)
Gene ID: k141_85517_12
Type: pfam
Location: 17152 - 18600 (-)
Gene ID: k141_85517_13
Type: pfam
Location: 18625 - 19797 (-)
Gene ID: k141_85517_14
Type: TC
Location: 19835 - 21490 (-)
Gene ID: k141_85517_15
Type: TC
Location: 21514 - 24513 (-)
Gene ID: k141_85517_16
Type: CAZyme
Location: 24619 - 26835 (-)
Gene ID: k141_85517_17
Type: CAZyme
Location: 27042 - 28892 (-)
Gene ID: k141_85517_18
Type: pfam
Location: 29134 - 30729 (+)
Gene ID: k141_85517_19
Type: TC
Location: 30852 - 32210 (-)
Gene ID: k141_85517_20
Type: CAZyme
Location: 32225 - 34903 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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