Cluster: CGMR036402_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_00365
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_110681 | k141_110681_13 | 15840 | 16430 | - | 1.B.14.6.1 |
| pfam | k141_110681 | k141_110681_14 | 16594 | 17610 | + | Beta_elim_lyase |
| CAZyme | k141_110681 | k141_110681_15 | 17657 | 18874 | - | GH88 |
| CAZyme | k141_110681 | k141_110681_16 | 18882 | 20810 | - | PL33_1 |
| TC | k141_110681 | k141_110681_17 | 20924 | 22639 | - | 8.A.46.1.3 |
| TC | k141_110681 | k141_110681_18 | 22654 | 25908 | - | 1.B.14.6.1 |
Gene ID: k141_110681_13
Type: TC
Location: 15840 - 16430 (-)
Type: TC
Location: 15840 - 16430 (-)
Gene ID: k141_110681_14
Type: pfam
Location: 16594 - 17610 (+)
Type: pfam
Location: 16594 - 17610 (+)
Gene ID: k141_110681_15
Type: CAZyme
Location: 17657 - 18874 (-)
Type: CAZyme
Location: 17657 - 18874 (-)
Gene ID: k141_110681_16
Type: CAZyme
Location: 18882 - 20810 (-)
Type: CAZyme
Location: 18882 - 20810 (-)
Gene ID: k141_110681_17
Type: TC
Location: 20924 - 22639 (-)
Type: TC
Location: 20924 - 22639 (-)
Gene ID: k141_110681_18
Type: TC
Location: 22654 - 25908 (-)
Type: TC
Location: 22654 - 25908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.