Cluster: CGMR036402_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_02539
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_29930 | k141_29930_2 | 630 | 2942 | - | GH92 |
| CAZyme | k141_29930 | k141_29930_3 | 2959 | 5223 | - | GH92 |
| CAZyme | k141_29930 | k141_29930_4 | 5264 | 7489 | - | GH92 |
| NULL(UNKNOWN) | k141_29930 | k141_29930_5 | 7701 | 8387 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_29930 | k141_29930_6 | 8516 | 9787 | - | GH154 |
| CAZyme | k141_29930 | k141_29930_7 | 9794 | 11068 | - | GH88 |
| TC | k141_29930 | k141_29930_8 | 11537 | 13240 | - | 8.A.46.1.4 |
| TC | k141_29930 | k141_29930_9 | 13259 | 16426 | - | 1.B.14.6.1 |
Gene ID: k141_29930_2
Type: CAZyme
Location: 630 - 2942 (-)
Type: CAZyme
Location: 630 - 2942 (-)
Gene ID: k141_29930_3
Type: CAZyme
Location: 2959 - 5223 (-)
Type: CAZyme
Location: 2959 - 5223 (-)
Gene ID: k141_29930_4
Type: CAZyme
Location: 5264 - 7489 (-)
Type: CAZyme
Location: 5264 - 7489 (-)
Gene ID: k141_29930_5
Type:
Location: 7701 - 8387 (+)
Type:
Location: 7701 - 8387 (+)
Gene ID: k141_29930_6
Type: CAZyme
Location: 8516 - 9787 (-)
Type: CAZyme
Location: 8516 - 9787 (-)
Gene ID: k141_29930_7
Type: CAZyme
Location: 9794 - 11068 (-)
Type: CAZyme
Location: 9794 - 11068 (-)
Gene ID: k141_29930_8
Type: TC
Location: 11537 - 13240 (-)
Type: TC
Location: 11537 - 13240 (-)
Gene ID: k141_29930_9
Type: TC
Location: 13259 - 16426 (-)
Type: TC
Location: 13259 - 16426 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.