Cluster: CGMR036402_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR036402
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_88511 | k141_88511_3 | 1518 | 2906 | - | 2.A.6.2.23 |
| TC | k141_88511 | k141_88511_4 | 2996 | 6205 | - | 2.A.6.2.22 |
| TC | k141_88511 | k141_88511_5 | 6214 | 7386 | - | 2.A.6.2.26 |
| TF | k141_88511 | k141_88511_6 | 7477 | 8313 | + | HTH_AraC |
| TF | k141_88511 | k141_88511_7 | 8438 | 9313 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_88511 | k141_88511_8 | 9334 | 10377 | - | GH29 |
Gene ID: k141_88511_3
Type: TC
Location: 1518 - 2906 (-)
Type: TC
Location: 1518 - 2906 (-)
Gene ID: k141_88511_4
Type: TC
Location: 2996 - 6205 (-)
Type: TC
Location: 2996 - 6205 (-)
Gene ID: k141_88511_5
Type: TC
Location: 6214 - 7386 (-)
Type: TC
Location: 6214 - 7386 (-)
Gene ID: k141_88511_6
Type: TF
Location: 7477 - 8313 (+)
Type: TF
Location: 7477 - 8313 (+)
Gene ID: k141_88511_7
Type: TF
Location: 8438 - 9313 (+)
Type: TF
Location: 8438 - 9313 (+)
Gene ID: k141_88511_8
Type: CAZyme
Location: 9334 - 10377 (-)
Type: CAZyme
Location: 9334 - 10377 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.