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Cluster: CGMR036402_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_106042 k141_106042_40 41030 42373 + 2.A.66.1.26
TC k141_106042 k141_106042_41 42423 43142 + 9.B.186.1.3
CAZyme k141_106042 k141_106042_42 43223 43933 + GT51
pfam k141_106042 k141_106042_43 43942 44772 - AmiA-like
TC k141_106042 k141_106042_44 44882 46657 - 3.B.1.1.6
STP k141_106042 k141_106042_45 46846 47349 - Sigma70_r2 | Sigma70_r4_2
TC k141_106042 k141_106042_46 47514 48122 - 1.A.62.2.1
pfam k141_106042 k141_106042_47 48205 49293 + Epimerase_2
TC k141_106042 k141_106042_48 49431 50819 - 9.B.168.1.2
peptidase k141_106042 k141_106042_49 51081 52682 + C26.964
TC k141_106042 k141_106042_50 52721 54586 + 2.A.9.3.1
Gene ID: k141_106042_40
Type: TC
Location: 41030 - 42373 (+)
Gene ID: k141_106042_41
Type: TC
Location: 42423 - 43142 (+)
Gene ID: k141_106042_42
Type: CAZyme
Location: 43223 - 43933 (+)
Gene ID: k141_106042_43
Type: pfam
Location: 43942 - 44772 (-)
Gene ID: k141_106042_44
Type: TC
Location: 44882 - 46657 (-)
Gene ID: k141_106042_45
Type: STP
Location: 46846 - 47349 (-)
Gene ID: k141_106042_46
Type: TC
Location: 47514 - 48122 (-)
Gene ID: k141_106042_47
Type: pfam
Location: 48205 - 49293 (+)
Gene ID: k141_106042_48
Type: TC
Location: 49431 - 50819 (-)
Gene ID: k141_106042_49
Type: peptidase
Location: 51081 - 52682 (+)
Gene ID: k141_106042_50
Type: TC
Location: 52721 - 54586 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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