Cluster: CGMR036402_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR036402
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_106042 | k141_106042_28 | 28370 | 29272 | + | 3.A.1.105.16 |
| TC | k141_106042 | k141_106042_29 | 29274 | 30728 | + | 3.A.1.105.15 |
| TC | k141_106042 | k141_106042_30 | 30770 | 31873 | + | 3.A.1.105.15 |
| TC | k141_106042 | k141_106042_31 | 31895 | 32998 | + | 3.A.1.105.4 |
| pfam | k141_106042 | k141_106042_32 | 33049 | 33837 | - | ExoX-like_C |
| CAZyme | k141_106042 | k141_106042_33 | 34074 | 36404 | - | GT51 |
Gene ID: k141_106042_28
Type: TC
Location: 28370 - 29272 (+)
Type: TC
Location: 28370 - 29272 (+)
Gene ID: k141_106042_29
Type: TC
Location: 29274 - 30728 (+)
Type: TC
Location: 29274 - 30728 (+)
Gene ID: k141_106042_30
Type: TC
Location: 30770 - 31873 (+)
Type: TC
Location: 30770 - 31873 (+)
Gene ID: k141_106042_31
Type: TC
Location: 31895 - 32998 (+)
Type: TC
Location: 31895 - 32998 (+)
Gene ID: k141_106042_32
Type: pfam
Location: 33049 - 33837 (-)
Type: pfam
Location: 33049 - 33837 (-)
Gene ID: k141_106042_33
Type: CAZyme
Location: 34074 - 36404 (-)
Type: CAZyme
Location: 34074 - 36404 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.