Cluster: CGMR036402_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR036402
- CGC Family ID: CGCFAM_01570
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_60294 | k141_60294_1 | 280 | 1251 | + | GH23 |
| TC | k141_60294 | k141_60294_2 | 1260 | 2114 | - | 1.A.1.24.3 |
| NULL(UNKNOWN) | k141_60294 | k141_60294_3 | 2065 | 2178 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_60294 | k141_60294_4 | 2232 | 5324 | + | GH2 |
| NULL(UNKNOWN) | k141_60294 | k141_60294_5 | 5612 | 6220 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_60294 | k141_60294_6 | 6262 | 7506 | - | GH109 |
| CAZyme | k141_60294 | k141_60294_7 | 7555 | 8535 | - | GH130_2 |
Gene ID: k141_60294_1
Type: CAZyme
Location: 280 - 1251 (+)
Type: CAZyme
Location: 280 - 1251 (+)
Gene ID: k141_60294_2
Type: TC
Location: 1260 - 2114 (-)
Type: TC
Location: 1260 - 2114 (-)
Gene ID: k141_60294_3
Type:
Location: 2065 - 2178 (-)
Type:
Location: 2065 - 2178 (-)
Gene ID: k141_60294_4
Type: CAZyme
Location: 2232 - 5324 (+)
Type: CAZyme
Location: 2232 - 5324 (+)
Gene ID: k141_60294_5
Type:
Location: 5612 - 6220 (+)
Type:
Location: 5612 - 6220 (+)
Gene ID: k141_60294_6
Type: CAZyme
Location: 6262 - 7506 (-)
Type: CAZyme
Location: 6262 - 7506 (-)
Gene ID: k141_60294_7
Type: CAZyme
Location: 7555 - 8535 (-)
Type: CAZyme
Location: 7555 - 8535 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.