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Cluster: CGMR036295_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_179237 k141_179237_32 42783 43979 - 9.B.1.1.3
pfam k141_179237 k141_179237_33 44023 45042 - TsaD | HypF_C_2
pfam k141_179237 k141_179237_34 45152 49711 + TamB
TC k141_179237 k141_179237_35 49860 51764 - 4.C.1.1.14
pfam k141_179237 k141_179237_36 51852 53312 - DUF4270
CAZyme k141_179237 k141_179237_37 53320 54129 - GT5
pfam k141_179237 k141_179237_38 54418 55266 + Pantoate_ligase
pfam k141_179237 k141_179237_39 55273 55620 + Asp_decarbox
TC k141_179237 k141_179237_40 55716 57038 + 3.A.5.1.1
Gene ID: k141_179237_32
Type: TC
Location: 42783 - 43979 (-)
Gene ID: k141_179237_33
Type: pfam
Location: 44023 - 45042 (-)
Gene ID: k141_179237_34
Type: pfam
Location: 45152 - 49711 (+)
Gene ID: k141_179237_35
Type: TC
Location: 49860 - 51764 (-)
Gene ID: k141_179237_36
Type: pfam
Location: 51852 - 53312 (-)
Gene ID: k141_179237_37
Type: CAZyme
Location: 53320 - 54129 (-)
Gene ID: k141_179237_38
Type: pfam
Location: 54418 - 55266 (+)
Gene ID: k141_179237_39
Type: pfam
Location: 55273 - 55620 (+)
Gene ID: k141_179237_40
Type: TC
Location: 55716 - 57038 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
G3-4614
→
Genus
Caccoplasma_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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