dbCAN Logo

Cluster: CGMR036295_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_960677 k141_960677_10 13382 14410 - GT2
CAZyme k141_960677 k141_960677_11 14410 15369 - GT2
pfam k141_960677 k141_960677_12 15369 16181 - Glycos_transf_2
pfam k141_960677 k141_960677_13 16227 17765 - PseudoU_synth_2
CAZyme k141_960677 k141_960677_14 17868 19679 - GH110
NULL(UNKNOWN) k141_960677 k141_960677_15 19761 20843 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_960677 k141_960677_16 20985 22952 + 1.B.6.1.14
pfam k141_960677 k141_960677_17 23399 25741 - Big_2 | Big_2
TC k141_960677 k141_960677_18 25769 26548 - 8.A.46.2.2
Gene ID: k141_960677_10
Type: CAZyme
Location: 13382 - 14410 (-)
Gene ID: k141_960677_11
Type: CAZyme
Location: 14410 - 15369 (-)
Gene ID: k141_960677_12
Type: pfam
Location: 15369 - 16181 (-)
Gene ID: k141_960677_13
Type: pfam
Location: 16227 - 17765 (-)
Gene ID: k141_960677_14
Type: CAZyme
Location: 17868 - 19679 (-)
Gene ID: k141_960677_15
Type:
Location: 19761 - 20843 (+)
Gene ID: k141_960677_16
Type: TC
Location: 20985 - 22952 (+)
Gene ID: k141_960677_17
Type: pfam
Location: 23399 - 25741 (-)
Gene ID: k141_960677_18
Type: TC
Location: 25769 - 26548 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
G3-4614
→
Genus
Caccoplasma_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List